Pairwise Alignments

Query, 642 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 950 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  141 bits (355), Expect = 2e-37
 Identities = 96/304 (31%), Positives = 158/304 (51%), Gaps = 22/304 (7%)

Query: 352 LDSKLARAAMDGMSAVVITDRQNRIIKVNNEFTRLSGYTFEDVKGKQPSIFASGLHKVEF 411
           L + +  AA +GM   VI D   R++ VN+    LSGY  E++ G+  +  A        
Sbjct: 403 LAATVFEAASEGM---VIMDATYRVLAVNDACCALSGYEREELLGRSIARIAGTPESQRQ 459

Query: 412 YMQMWKALQDNGVWEGEVINKRKDGESITEILRIQSIRDEDNVIQFYVASFVDISHRKAL 471
           Y  M  AL+ +G W+GE+I KRK GE   + ++++ +RD D+ +   VA   D+S R+ +
Sbjct: 460 YEAMRDALERHGHWQGELIEKRKSGEVYPQWVQLREVRDSDDSVTHVVAFISDLSVRRKI 519

Query: 472 ENRLRELSEKDALTDLWNRRKFDQTISLECAKRRRYPDQAQSCLAIIDIDHFKRINDKFG 531
           E RLR L+  D LT L NR  F + +   C + RR  +     +  ID+D FK +N+  G
Sbjct: 520 EERLRYLTHYDDLTGLANRGLFKERLHEACQRVRR--NGRNMAVLYIDLDRFKLLNESLG 577

Query: 532 HNEGDLVLRTVAKGIQDQLRESDFIARIGGEEFAIIF-PYTSIEE----AEQVLNRVRLH 586
           H   D +LR V++ +   L E+D IAR+ G+EF ++   Y S+        ++L R+R  
Sbjct: 578 HEAADALLREVSRRLSTTLAEADTIARLSGDEFVVLLDAYGSLSSLAHLGSRLLQRIRKP 637

Query: 587 IASLHHQQVTLSGGVTDVCTSPDQS------YKRADLALYESKTSGRNQISVLT----AM 636
           +  +  Q++ +S  +  V   PD S       ++A++A+ ++K  G N +   T    A 
Sbjct: 638 MV-IDEQELVISASI-GVSLLPDNSRDAEALLRQANIAMQQAKHLGGNTLQFFTDRPQAS 695

Query: 637 EMHH 640
            MH+
Sbjct: 696 SMHY 699