Pairwise Alignments

Query, 642 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 828 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) from Pseudomonas syringae pv. syringae B728a

 Score =  163 bits (413), Expect = 3e-44
 Identities = 99/281 (35%), Positives = 147/281 (52%), Gaps = 19/281 (6%)

Query: 367 VVITDRQNRIIKVNNEFTRLSGYTFEDVKGKQPSIFASGLHKVEFYMQMWKALQDNGVWE 426
           V+IT+    I  VN  FT ++GY+  +  GK P + ASG H   FY  MW  L   G W+
Sbjct: 276 VLITNTDQSISAVNRAFTEITGYSESEAIGKTPRLLASGQHDSAFYAAMWHQLAAEGHWQ 335

Query: 427 GEVINKRKDGESITEILRIQSIRDEDNVIQFYVASFVDISHRKALENRLRELSEKDALTD 486
           GE+ N+RK+GE     L I ++R++DN++  +VA F DIS  K  + RL   +  D LT 
Sbjct: 336 GEISNRRKNGELYPSWLTISAVRNKDNLLTHFVAVFADISSLKQAQARLDYQAHHDPLTG 395

Query: 487 LWNRRKFDQTISLECAKRRRYPDQAQSCLAIIDIDHFKRINDKFGHNEGDLVLRTVAKGI 546
           L NR  F+    L+ A        +   +  +D+D FK IND  GH  GDL+L+ +A  +
Sbjct: 396 LPNRILFES--RLQAALLHSEESGSLGAVLFLDLDRFKHINDSLGHPVGDLLLKGIAHRL 453

Query: 547 QDQLRESDFIARIGGEEFAIIFP-YTSIEEAEQVLNRVRLHI-----ASLHHQQVTLSGG 600
           ++ LR+ D +AR+GG+EF ++ P      +A+ + N++         A  H   ++ S G
Sbjct: 454 KETLRDIDTVARLGGDEFIVLLPGLLQTSDAQAIANKLLACFSTPFEAGEHELYISPSIG 513

Query: 601 V-------TDVCTSPDQSYKRADLALYESKTSGRNQISVLT 634
                   TDV T      K AD A+Y SK  GRN++   T
Sbjct: 514 SCVFPTDGTDVAT----LVKNADAAMYRSKAKGRNRVESYT 550