Pairwise Alignments

Query, 642 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1278 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) from Pseudomonas syringae pv. syringae B728a

 Score =  133 bits (335), Expect = 4e-35
 Identities = 93/290 (32%), Positives = 143/290 (49%), Gaps = 27/290 (9%)

Query: 365  SAVVITDRQNRIIKVNNEFTRLSGYTFEDVKGKQPSIFASGLHKVEFYMQMWKALQDNGV 424
            SA++ITD    I++ N  FTR+SGY    V  + P +      +      + + L   G 
Sbjct: 729  SAILITDPAGYIVQANEAFTRVSGYEVAQVLDQLPGMLTVESEQETRLRHILRQLNGQGT 788

Query: 425  WEGEVINKRKDGESITEILRIQSIRDEDNVIQFYVASFVDISHRKALENRLRELSEKDAL 484
            WEGE+  KR++GE     + I ++ D++  +  YV  F DIS RKA E+R+  L+  DAL
Sbjct: 789  WEGEIRLKRRNGEHYPAWVGITAVLDDEGDLASYVCFFSDISERKASEDRIHRLAYYDAL 848

Query: 485  TDLWNRRKFDQTI--SLECAKRRRYPDQAQSCLAIIDIDHFKRINDKFGHNEGDLVLRTV 542
            T L NR  F   +  +L+ A+R+    QA   L  +D+D FK IND  GH  GD +L+ +
Sbjct: 849  THLPNRTLFQDRLHSALQHAERQ----QAWVVLMFLDLDRFKPINDSLGHAAGDRMLQEM 904

Query: 543  AKGIQDQLRESDFIARIGGEEFAIIFPYTSIEEAEQVLNRVRLHIAS-----------LH 591
            A  +   +   D +AR+GG+EF ++      E  E  LNR  +H+A            L 
Sbjct: 905  ATRLLACVSVDDTVARMGGDEFTLLL--EPDESREAALNRA-IHVAERILTSLITPFVLE 961

Query: 592  HQQVTLSGGVTDVCTSP------DQSYKRADLALYESKTSGRNQISVLTA 635
             ++  ++  +  +  SP       Q  K AD A+Y +K  G+N      A
Sbjct: 962  GREFFVTASI-GIALSPQDGKELSQLMKNADTAMYHAKERGKNNFQFYQA 1010