Pairwise Alignments

Query, 642 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1494 a.a., sensory box protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  126 bits (316), Expect = 8e-33
 Identities = 89/278 (32%), Positives = 131/278 (47%), Gaps = 11/278 (3%)

Query: 366  AVVITDRQNRIIKVNNEFTRLSGYTFEDVKGKQPSIFASGLHKVEFYMQMWKALQDNGVW 425
            AVV+     RI  VN  F+ ++G+  E V+GK          +   Y  + + L  N  W
Sbjct: 953  AVVVGGLDYRIASVNPAFSLITGFNPEQVQGKHFLFLTHDRKQRHIYEAIEQQLLRNKHW 1012

Query: 426  EGEVINKRKDGESITEILRIQSIRDEDNVIQFYVASFVDISHRKALENRLRELSEKDALT 485
             GE+  + +D  +I   L I  + D       +VA F DI+ RK  E  LR L+  D LT
Sbjct: 1013 AGELKIRTRDQRAILIWLEINQVLDSKAEASHFVAVFTDITDRKKAEEDLRLLASYDPLT 1072

Query: 486  DLWNRRKFDQTISLECAKRRRYPDQAQSCLAIIDIDHFKRINDKFGHNEGDLVLRTVAKG 545
            +L NR  F   +    A+  R  +     L  +D+D FK IND  GH+ GDL+L+ VA  
Sbjct: 1073 NLPNRTLFQDRLDHALAQAHRTGNMV--ALLFLDLDRFKHINDSMGHHIGDLLLKAVAHR 1130

Query: 546  IQDQLRESDFIARIGGEEFAIIFPYTSIEEAEQVLNRVRLHIAS----LHHQQVTLSGGV 601
            +Q+ +RE D +AR+GG+EF II    +  +A  V+    +        L  Q + +S  +
Sbjct: 1131 LQNCVREGDTVARLGGDEFTIILEGVAKTKAATVIAEKLIRAFQTPFILEDQALNISPSI 1190

Query: 602  TDVCTSPDQS-----YKRADLALYESKTSGRNQISVLT 634
                   D S      K AD A+Y +K+ GRN     T
Sbjct: 1191 GISLYPMDASDSTSLVKYADTAMYHAKSLGRNNFQFYT 1228