Pairwise Alignments

Query, 642 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1036 a.a., sensory box protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  123 bits (309), Expect = 4e-32
 Identities = 89/299 (29%), Positives = 151/299 (50%), Gaps = 20/299 (6%)

Query: 350 NSLDSKLARAAMDGMS-AVVITDRQNRIIKVNNEFTRLSGYTFEDVKGKQPSIFASGLHK 408
           N    +LA +  +  S A+ + D +  II VN  F  ++GY+ ++V G   S F    +K
Sbjct: 451 NQEQMELAASVYNNSSEAMSVMDHKGNIITVNAAFADITGYSPKEVLGHHISQFYCPRNK 510

Query: 409 VEFYMQMWKALQDNGVWEGEVINKRKDGESITEILRIQSIRDEDNVIQFYVASFVDISHR 468
             FY ++ +A+++ G W+GE+  + K+G+     L + +I D        VA F DI+ +
Sbjct: 511 PAFYDEVNQAIKETGRWQGEMWQQHKNGKEYLIWLTVNTIYDAYQRPHRRVALFSDITEK 570

Query: 469 KALENRLRELSEKDALTDLWNRRK----FDQTISLECAKRRRYPDQAQSCLAIIDIDHFK 524
           KA E  + + +  D LT L NRR      D+ ISL   +  R+       L  +D+D FK
Sbjct: 571 KAQEQLIWQQANYDPLTKLPNRRMLLDYLDREISLASRQNVRF------ALLFLDLDFFK 624

Query: 525 RINDKFGHNEGDLVLRTVAKGIQDQLRESDFIARIGGEEFAIIF-PYTSIEEAEQVLNRV 583
            +ND  GH+ GD +L   A  I+  +R+SD +AR+GG+EF ++      +   E+  + +
Sbjct: 625 EVNDTLGHDMGDKLLIECADRIKACIRDSDVVARLGGDEFTVLIRDIHDVGGVERAASNI 684

Query: 584 RLHIASLHH-----QQVTLSGGVT---DVCTSPDQSYKRADLALYESKTSGRNQISVLT 634
              IA           +++S G+T   +  ++ +   K AD A+Y +K  GRN+ +  T
Sbjct: 685 LKAIAEPFQLGPDSAYISVSIGITLFPEDASTREALLKNADQAMYAAKEQGRNRFNYFT 743