Pairwise Alignments

Query, 642 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 751 a.a., sensory box protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  156 bits (394), Expect = 4e-42
 Identities = 99/296 (33%), Positives = 155/296 (52%), Gaps = 22/296 (7%)

Query: 352 LDSKLARAAMDGMSAVVITDRQNRIIKVNNEFTRLSGYTFEDVKGKQPSIFASGLHKVEF 411
           L SK+   A++G   V+ITD    I ++N  F  ++GY+ ++V GK P +  SG H+ +F
Sbjct: 202 LTSKVFENAIEG---VMITDSNGIITEINGAFETITGYSRDEVIGKTPKLLNSGRHERDF 258

Query: 412 YMQMWKALQDNGVWEGEVINKRKDGESITEILRIQSIRDEDNVIQFYVASFVDISHRKAL 471
           +  +W+AL+  G W GE+ N+RK+G    E   I ++  ED  ++ +VA F DIS  K  
Sbjct: 259 FENLWRALKTQGHWHGEIWNRRKNGTLFAEQTSISAVYGEDGQVRCFVAVFSDISLLKQT 318

Query: 472 ENRLRELSEKDALTDLWNRRKF----DQTISLECAKRRRYPDQAQSCLAIIDIDHFKRIN 527
           E  + +L+  D LT L NR K      Q I L   ++ R        L +ID+D FK IN
Sbjct: 319 EAEVAQLAWHDPLTRLPNRSKLTTISQQQIKLAANRKTRL------ALLLIDVDLFKHIN 372

Query: 528 DKFGHNEGDLVLRTVAKGIQDQLRESDFIARIGGEEFAIIFPYTSIEEAEQVLNRVR--- 584
           D FGH  GD VL ++++ +   L   D +ARIGG+EF ++      ++   +L+ ++   
Sbjct: 373 DSFGHLAGDKVLLSLSERLAALLGAEDTLARIGGDEFVLLTQVRRRDDIPVILSAIQRAF 432

Query: 585 -LHIASLHHQQVTLSGGV-----TDVCTSPDQSYKRADLALYESKTSGRNQISVLT 634
                +   + V LS  +      D   +PD   K AD A+Y +K  GRN+ +  T
Sbjct: 433 DTSFDTSEGESVRLSASIGIAVYPDDGDNPDTLLKNADAAMYRAKQQGRNRHAFYT 488