Pairwise Alignments

Query, 642 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1069 a.a., sensory box protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  166 bits (420), Expect = 5e-45
 Identities = 96/277 (34%), Positives = 148/277 (53%), Gaps = 11/277 (3%)

Query: 367 VVITDRQNRIIKVNNEFTRLSGYTFEDVKGKQPSIFASGLHKVEFYMQMWKALQDNGVWE 426
           +++TD  N I  +N  F++++GY+ E+VKG+ PSI +S  +    Y  MW++L+  G WE
Sbjct: 518 IMVTDADNHIELINPAFSQITGYSIEEVKGRNPSILSSHRNPPHLYDAMWESLRSTGKWE 577

Query: 427 GEVINKRKDGESITEILRIQSIRDEDNVIQFYVASFVDISHRKALENRLRELSEKDALTD 486
           GE+ N+RKDGE   E L I  +RD++  I  ++  F+DIS RK  E  +   +  D LTD
Sbjct: 578 GEIWNRRKDGEVYPEYLAITLVRDDEGQIVHHIGLFMDISRRKQYEQDIWYKANFDTLTD 637

Query: 487 LWNRRKFDQTISLECAKRRRYPDQAQSCLAIIDIDHFKRINDKFGHNEGDLVLRTVAKGI 546
           L NR+   + +  E        D  +  + ++D+D FK IND  GH+ GDL+L+ VAK +
Sbjct: 638 LPNRKLLSERLGHELKMAEH--DGRKLAVMVLDLDRFKYINDTQGHDCGDLLLKAVAKRL 695

Query: 547 QDQLRESDFIARIGGEEFAIIFPYTSIEEA-EQVLNRV--------RLHIASLHHQQVTL 597
           Q  +  +DFIAR+GG+EF I+ P  + E A EQ   R+        ++   S+       
Sbjct: 696 QTVMGSTDFIARLGGDEFVIVLPRLAQEHAVEQYAKRLLQSMGDPFKVEQGSMSVSASLG 755

Query: 598 SGGVTDVCTSPDQSYKRADLALYESKTSGRNQISVLT 634
            G         +     A+ A+Y +K  GRN     T
Sbjct: 756 IGLYPQDGLDVETLLSNAETAMYGAKDEGRNHFKYFT 792