Pairwise Alignments

Query, 642 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 855 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

 Score =  127 bits (320), Expect = 2e-33
 Identities = 81/282 (28%), Positives = 139/282 (49%), Gaps = 21/282 (7%)

Query: 367 VVITDRQNRIIKVNNEFTRLSGYTFEDVKGKQPSIFASGLHKVEFYMQMWKALQDNGVWE 426
           +V+ +R   +  VN  F  ++G   +D++G+   +FASGLH+ +F   +   +   G+W 
Sbjct: 301 IVLLERDLTVRTVNPAFEAMTGLLRQDMEGRPARLFASGLHENDFLATVAAEVDRAGLWR 360

Query: 427 GEVINKRKDGESITEILRIQSIRDEDNVIQFYVASFVDISHRKALENRLRELSEKDALTD 486
           GE+  +R++G   +  + + ++R        YVA+  DI+ RK  E  +R  +  D LT 
Sbjct: 361 GEIWGERREGPPYSGEMTVTAVRTRAGETTHYVAAITDITKRKRDEEHIRFQANFDMLTH 420

Query: 487 LWNRRKFDQTISLECAKRRRYPDQAQSCLAIIDIDHFKRINDKFGHNEGDLVLRTVAKGI 546
           L NR        LE A  +      Q C+  +D+D FK+IND +GH+ GD VL+  A+ +
Sbjct: 421 LPNRHLIMD--RLEQAMHQAQRTGRQVCVMFLDLDRFKQINDSYGHSAGDEVLKLTARRL 478

Query: 547 QDQLRESDFIARIGGEEFAIIFPYTSIEEAEQVLNRVRLHIASLHHQQVTLSGGVTDVC- 605
           ++ +R SD + R+GG+EF +I      + A   +    L+  S    +    GG    C 
Sbjct: 479 RNCVRISDSVGRLGGDEFIVILSNVEDQHAGAYIAEKILYSLS----EPFPIGGTEVFCI 534

Query: 606 -------------TSPDQSYKRADLALYESKTSGRNQISVLT 634
                        T+PD   + AD+A+Y +K  G  + ++ T
Sbjct: 535 PSVGITYFPDHGETAPD-LLRNADVAMYHAKQGGERRYAIFT 575