Pairwise Alignments

Query, 642 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1301 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and Response Regulator Receiver modulation (NCBI) from Rhodospirillum rubrum S1H

 Score =  129 bits (325), Expect = 6e-34
 Identities = 85/275 (30%), Positives = 134/275 (48%), Gaps = 12/275 (4%)

Query: 362  DGMSAVVITDRQNRIIKVNNEFTRLSGYTFEDVKGKQPSIFASGLHKVEFYMQMWKALQD 421
            + M  + +TD +  I+ VN  F++++ Y   +V G+   I  SG    EFY+ +W+ +  
Sbjct: 758  NSMEGIFVTDLKGSILAVNPAFSQITLYEAAEVLGRNARILQSGRQNREFYVALWQDVLT 817

Query: 422  NGVWEGEVINKRKDGESITEILRIQSIRDEDNVIQFYVASFVDISHRKALENRLRELSEK 481
             G W GE+ N+R+DGE   E L I S+R+    +  Y+  F D+S  K  E +   L+  
Sbjct: 818  IGSWRGEIWNRRRDGEVFPEWLSISSVRNHQGEVTNYIGIFSDLSRIKHSEAKFHHLAHH 877

Query: 482  DALTDLWNRRKFDQTISLECAKRRRYPDQAQSCLAIIDIDHFKRINDKFGHNEGDLVLRT 541
            D LT L NR      +     + RR     +  +  +D+D FK IND  GH  GD +LRT
Sbjct: 878  DPLTGLPNRLLLRSRLDHAIERARR--TGGRCAVLFLDLDRFKMINDSLGHRAGDTLLRT 935

Query: 542  VAKGIQDQLRESDFIARIGGEEF-AIIFPYTSIEE----AEQVLNRVRLHIASLHHQQVT 596
            +   +   L ++  +AR+GG+EF A+I     I      A  +L R+R         +V 
Sbjct: 936  LGARLTACLGDTGTLARLGGDEFVAVIEDIDGIPAVGTIALTMLERLREPCRLSEGPEVC 995

Query: 597  LSGGV-----TDVCTSPDQSYKRADLALYESKTSG 626
            + G V      +   +PD   + AD AL + K +G
Sbjct: 996  IGGSVGISLFPEDGDNPDTLLQHADTALGQVKGAG 1030



 Score = 26.9 bits (58), Expect = 0.006
 Identities = 14/43 (32%), Positives = 23/43 (53%)

Query: 433 RKDGESITEILRIQSIRDEDNVIQFYVASFVDISHRKALENRL 475
           RK GES+   L +  +RD  N   ++++   +I  RK  E +L
Sbjct: 707 RKTGESLWINLTVSLVRDIHNAPAYFISVVENIQSRKEAELQL 749