Pairwise Alignments

Query, 642 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 886 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

 Score =  125 bits (313), Expect = 1e-32
 Identities = 86/273 (31%), Positives = 127/273 (46%), Gaps = 15/273 (5%)

Query: 365 SAVVITDRQNRIIKVNNEFTRLSGYTFEDVKGKQPSIFASGLHKVEFYMQMWKALQDNGV 424
           +A+VITD + R+  VN  +  LSGY  + + G  P++ A         ++ W  L+   V
Sbjct: 330 NAIVITDGEGRVEWVNEAYHLLSGYERDQIIGTLPAVLAGPSAANPTAIEAWPTLRAGQV 389

Query: 425 WEGEVINKRKDGESITEILRIQSIRDEDNVIQFYVASFVDISHRKALENRLRELSEKDAL 484
           W GE+    +DG +      I  I D    +   VA   D++ RK  E R+R LS  D L
Sbjct: 390 WRGEIHETHRDGRTYIVDKTITPIVDASGRLSHLVAVDEDVTARKKAEERIRYLSNYDTL 449

Query: 485 TDLWNRRKFDQTISLECAKRRRYPDQAQSCLAIIDIDHFKRINDKFGHNEGDLVLRTVAK 544
           T L NR  F   +     + RR        +  ID+D F  +ND  GH  GD +L T+A 
Sbjct: 450 TRLPNRVLFRDRLYQAVVQARR--GHGGLAVMFIDLDQFSLVNDTLGHAAGDHLLMTIAS 507

Query: 545 GIQDQLRESDFIARIGGEEFAIIFPYTSIEEAEQVLNRVRLHI------ASLHHQQVTLS 598
            I     E+D +AR+GG+EFA+I   T++  A+   +  R  I        L  ++V + 
Sbjct: 508 RINAAAEEADTVARVGGDEFALI--QTALTSADSAASLARRLIDVIRTPVDLGGREVVIG 565

Query: 599 GGVTDVC-----TSPDQSYKRADLALYESKTSG 626
             V         T PD   K AD+A+Y +  SG
Sbjct: 566 ANVGIAIYPQDGTDPDNLMKNADMAMYRAVKSG 598