Pairwise Alignments

Query, 642 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 764 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

 Score =  155 bits (391), Expect = 8e-42
 Identities = 99/289 (34%), Positives = 146/289 (50%), Gaps = 11/289 (3%)

Query: 355 KLARAAMDGMSAVVITDRQNRIIKVNNEFTRLSGYTFEDVKGKQPSIFASGLHKVEFYMQ 414
           KL+ A     +++VITD   RI   N  FT++SGYT ++  G++PSI  SGL   E Y  
Sbjct: 189 KLSHAVEQSSASIVITDADGRIEYANPAFTKISGYTAQEAIGRRPSILKSGLVPAETYRA 248

Query: 415 MWKALQDNGVWEGEVINKRKDGESITEILRIQSIRDEDNVIQFYVASFVDISHRKALENR 474
           +W+ + + G W GE  N+RKDG    E+  I  IRD    I  +VA   D++ RKA+E+ 
Sbjct: 249 LWQTITNGGEWRGEFHNRRKDGTLYWEMASISPIRDARGKITNFVAVKDDVTERKAIESE 308

Query: 475 LRELSEKDALTDLWNRRKFDQTISLECAKRRRYPDQAQSCLAIIDIDHFKRINDKFGHNE 534
           L   +  DALT L NR+     +S      RR+    +  +  +DID FK+IND  GH  
Sbjct: 309 LYHRANYDALTGLPNRQLLLDRVSTALDLARRH--DRRVAVMFMDIDRFKQINDSMGHAA 366

Query: 535 GDLVLRTVAKGIQDQLRESDFIARIGGEEFAIIFPYTSIEEAEQVLNRVRLHIASL---- 590
           GD++L+  A  +   LR  D + R+GG+EF ++ P    E     L    L +A      
Sbjct: 367 GDVLLKQAASRLAAVLRPQDTLGRLGGDEFLVVAPGLRWESEATALASRLLEVARRPFTI 426

Query: 591 --HHQQVTLSGGVT---DVCTSPDQSYKRADLALYESKTSGRNQISVLT 634
                 V++S GV+      T+     + AD A+Y +K  GR+     T
Sbjct: 427 DGREVYVSVSIGVSLGPVDGTTAQALMRNADAAMYLAKGGGRDAAHFFT 475