Pairwise Alignments

Query, 642 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1010 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score =  137 bits (345), Expect = 2e-36
 Identities = 90/278 (32%), Positives = 143/278 (51%), Gaps = 11/278 (3%)

Query: 366 AVVITDRQNRIIKVNNEFTRLSGYTFEDVKGKQPSIFASGLHKVEFYMQMWKALQDNGVW 425
           A+ + D +  II +N  FT ++GY+ E+   +   I  S       Y +M  A++D G W
Sbjct: 468 AMSVQDHKGHIITINAAFTAITGYSQEEALTQNIRILQSSRTPRSQYDEMNSAIRDTGYW 527

Query: 426 EGEVINKRKDGESITEILRIQSIRDEDNVIQFYVASFVDISHRKALENRLRELSEKDALT 485
           +GE+  K K GE     L I +I D+   +   VA F DI+ +K  E+ + + +  D LT
Sbjct: 528 QGELWIKNKSGEEYMVWLTINTIFDQHGQVYRRVALFSDITEKKEAEHIIWKQANYDPLT 587

Query: 486 DLWNRRKFDQTISLECAKRRRYPDQAQSCLAIIDIDHFKRINDKFGHNEGDLVLRTVAKG 545
            L NRR   + ++ E  +  R  + +   L  +D+D FK +ND  GH+ GDL+L+  AK 
Sbjct: 588 GLPNRRMLLEYLNTEILRIDR--NHSHFALMFLDLDFFKEVNDTLGHDMGDLLLQETAKR 645

Query: 546 IQDQLRESDFIARIGGEEFAIIFP-YTSIEEAEQVLNRVRLHIASLHH-----QQVTLSG 599
           ++  +RESD +AR+GG+EF ++     S    E+V   +   IA  +        ++ S 
Sbjct: 646 LKGCIRESDVVARLGGDEFTVVLSGIDSPSGVERVAQSILERIAEPYSLGDETAYISASI 705

Query: 600 GVT---DVCTSPDQSYKRADLALYESKTSGRNQISVLT 634
           G+T   D  TS +   K AD A+Y +K  GRN+    T
Sbjct: 706 GITIYPDDATSIEGLLKHADQAMYAAKEQGRNRFHYFT 743