Pairwise Alignments

Query, 642 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1094 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score =  170 bits (431), Expect = 3e-46
 Identities = 96/273 (35%), Positives = 158/273 (57%), Gaps = 15/273 (5%)

Query: 367 VVITDRQNRIIKVNNEFTRLSGYTFEDVKGKQPSIFASGLHKVEFYMQMWKALQDNGVWE 426
           +V+TD+ N I  VN  FT+++GYT E+VKG+ P++  S      FY QMW++L+  G W+
Sbjct: 546 IVVTDKDNLIEAVNPAFTQITGYTLEEVKGRSPAVLNSHQQPHHFYEQMWQSLKQYGKWQ 605

Query: 427 GEVINKRKDGESITEILRIQSIRDEDNVIQFYVASFVDISHRKALENRLRELSEKDALTD 486
           GE+ NKRK+G+   E L I  ++D+   +  ++  F+DIS+RK  E  +   S  DALT+
Sbjct: 606 GEIWNKRKNGQIFPEYLAITVVKDDKGRVVQHIGLFLDISNRKKYEQDIWYKSNYDALTN 665

Query: 487 LWNRRKFDQTIS--LECAKRRRYPDQAQSCLAIIDIDHFKRINDKFGHNEGDLVLRTVAK 544
           L NR+ +   +S  L+ A++R         +  ID+D FK IND +GH  GD +L+  A 
Sbjct: 666 LPNRQLYTSRLSQMLQLAEQR----CCSVAVLFIDLDRFKYINDIYGHAVGDELLQVAAA 721

Query: 545 GIQDQLRESDFIARIGGEEFAIIFPYTSIE-EAEQVLNRVRLHIAS---LHHQQVTLSGG 600
            ++  L + DF+AR+ G+EF ++  +T  + E EQ    +  H++S   ++  ++ +S  
Sbjct: 722 RLEALLEQHDFVARLSGDEFVVVMGHTKHQGEIEQRAQNILQHLSSPFGINRNELLISAS 781

Query: 601 VTDVC-----TSPDQSYKRADLALYESKTSGRN 628
           V   C     TS +   + A+ A+Y++K  GRN
Sbjct: 782 VGISCYPSNGTSVEVLTRNAETAMYQAKQDGRN 814