Pairwise Alignments

Query, 642 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 833 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  135 bits (340), Expect = 7e-36
 Identities = 83/272 (30%), Positives = 141/272 (51%), Gaps = 14/272 (5%)

Query: 366 AVVITDRQNRIIKVNNEFTRLSGYTFEDVKGKQPSIFASGLHKVEFYMQMWKALQDNGVW 425
           AV++TD   R++ VN  F  ++G++  +V+   P++            ++  AL  +G W
Sbjct: 295 AVIVTDAMQRVLSVNKAFCDITGFSEAEVRMSLPALLQPTRDDPNLAAEIQVALASSGAW 354

Query: 426 EGEVINKRKDGESITEILRIQSIRDEDNVIQFYVASFVDISHRKALENRLRELSEKDALT 485
           +GE+ ++RK+G++    + I S+++   ++  Y   F DIS RK  E ++  L+  DALT
Sbjct: 355 QGELWDRRKNGDTYPVWVSISSVKNTRGILSHYFLVFSDISERKEAERQIYRLAYYDALT 414

Query: 486 DLWNRRKFDQTISLECAKRRRYPDQAQSCLAIIDIDHFKRINDKFGHNEGDLVLRTVAKG 545
            L NR      +     + +R  +Q    +  +D+D FK IND FGH   D +L+ VA+ 
Sbjct: 415 GLPNRSLLFSLLEQALIEAQR--NQTHGAVLFVDLDRFKTINDSFGHAPADALLKEVARR 472

Query: 546 IQDQLRESDFIARIGGEEFAI-IFPYTSIEEAEQVLNRVRLHIA---SLHHQQVTLSGGV 601
           +Q+ LR  D +AR+GG+EF + +F  T  E A  V  ++   +A    + H +V L+  +
Sbjct: 473 LQETLRAEDVVARLGGDEFIVALFDITKREHAALVGQKILDALAEPFQIVHHEVLLTASI 532

Query: 602 TDVCTSPDQS------YKRADLALYESK-TSG 626
             +   PD         + AD A+Y  K TSG
Sbjct: 533 -GIAVFPDDGRDAETLLRNADTAMYRVKQTSG 563



 Score = 31.2 bits (69), Expect = 2e-04
 Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 3/114 (2%)

Query: 366 AVVITDRQNRIIKVNNEFTRLSGYTFEDVKGKQPSIFAS--GLHKVEFYMQM-WKALQDN 422
           +V+  D    I+  N    RL GYT  +  G+      +  G   +E    + + A  D+
Sbjct: 170 SVITMDLSGYIMGWNKGAERLFGYTAAEAVGRHILFLYADDGSETLEEEDDLFYNAFLDH 229

Query: 423 GVWEGEVINKRKDGESITEILRIQSIRDEDNVIQFYVASFVDISHRKALENRLR 476
           G  E EV  ++K GE     + +   R+E       +   VDI+++   E +LR
Sbjct: 230 GRREFEVRRRKKSGEVFWASVSLSLSRNEAGEPAGLIGYLVDITNQLEREEKLR 283