Pairwise Alignments

Query, 642 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 912 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  167 bits (424), Expect = 1e-45
 Identities = 102/280 (36%), Positives = 152/280 (54%), Gaps = 14/280 (5%)

Query: 359 AAMDGMSAVVITDRQNRIIKVNNEFTRLSGYTFEDVKGKQPSIFASGLHKVEFYMQMWKA 418
           AA +G   V+ITD    +   N  F  ++GY+ E+V G++ S F SG+H  +FY Q+W  
Sbjct: 625 AAAEG---VIITDANGVVEYANPAFCDMTGYSLEEVLGQRTSRFKSGVHDADFYRQLWGT 681

Query: 419 LQDNGVWEGEVINKRKDGESITEILRIQSIRDEDNVIQFYVASFVDISHRKALENRLREL 478
           +     W GEV+N+RKDG    E+L I  +++E   +  YVA   DIS RK +E RL  L
Sbjct: 682 ITSGNPWRGEVVNRRKDGMLYHELLTIAPVKNEQGAVVRYVAIKHDISERKRIEQRLEHL 741

Query: 479 SEKDALTDLWNRRKFDQTISLECAKRRRYPDQAQSCLAIIDIDHFKRINDKFGHNEGDLV 538
           +  D LTDL NR  F   +     + +RY  Q    + ++D+D FK +ND  GH  GDL+
Sbjct: 742 AHFDLLTDLPNRTLFFDRLQQAFFRAQRY--QEGLAVLVLDLDGFKAVNDSQGHQAGDLL 799

Query: 539 LRTVAKGIQDQLRESDFIARIGGEEFAIIF-----PYTSIEEAEQVLNRVRLHIASLHHQ 593
           L   A  ++  LR+SD  AR+GG+EF ++         ++  A +VL  +      L  +
Sbjct: 800 LAAFAYRLKQTLRQSDTAARMGGDEFTVLLHGVRQDEDAVTAANKVLEALVQPFDILGQR 859

Query: 594 -QVTLSGGVT---DVCTSPDQSYKRADLALYESKTSGRNQ 629
            QV+ S GV        SPD   + AD A+YE+K +G+N+
Sbjct: 860 CQVSASIGVALFHQAYASPDMLVQAADGAMYEAKRAGKNR 899