Pairwise Alignments

Query, 642 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1126 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  154 bits (390), Expect = 2e-41
 Identities = 101/332 (30%), Positives = 167/332 (50%), Gaps = 25/332 (7%)

Query: 311 IDKTYANARWALMSQAVTVLSLLSIIAAGFAAWNINHLKNSLDS-KLARAAMDGMS-AVV 368
           + +TY   +  L     ++  +L I      + +I  +K + +  +LA   M+  +  V+
Sbjct: 535 VQRTYLTTKCPLPGPDGSLRGVLGI------STDITEIKQTTEQLRLAGVVMENTADGVM 588

Query: 369 ITDRQNRIIKVNNEFTRLSGYTFEDVKGKQPSIFASGLHKVEFYMQMWKALQDNGVWEGE 428
           ITD +  I+ VN  FT ++GYT  +  G+ PS+  S   + EFY  MW+ L   G+W GE
Sbjct: 589 ITDARGVILSVNKAFTDITGYTAAEALGQLPSLLRSDRQEPEFYRLMWETLASTGIWRGE 648

Query: 429 VINKRKDGESITEILRIQSIRDEDNVIQFYVASFVDISHRKALENRLRELSEKDALTDLW 488
           + N+RK+G    E L I ++ D++     YV  F DIS  K  ++ L  L+  D LT L 
Sbjct: 649 IWNRRKNGALFPEWLTINAVLDQEGKPVNYVGVFSDISAIKHSQDELERLAHFDPLTGLP 708

Query: 489 NRRKFDQTISLECAKRRRYPDQAQSCLAIIDIDHFKRINDKFGHNEGDLVLRTVAKGIQD 548
           NR  F   +     + +RY  +    + ++D+D FK +ND  GH  GDL+L+  A   ++
Sbjct: 709 NRTLFHDRLQHALERAQRYGQEL--AVLLLDLDGFKTVNDSLGHPTGDLLLQQAAHRFKE 766

Query: 549 QLRESDFIARIGGEEFAIIFPYTSIEEAEQVLNRVRLHIASLHHQQVTLSGGVTDVCTS- 607
            +R  D ++R+GG+EFAII    ++ +    ++ V+  + +L  +   L G    V TS 
Sbjct: 767 CVRVEDTVSRLGGDEFAIIL--NNLAQGTDAISVVKKLLQAL-QEPFDLDGTAALVTTSI 823

Query: 608 -----------PDQSYKRADLALYESKTSGRN 628
                      P+   + AD A+Y +K  GRN
Sbjct: 824 GIAIAPLDGDTPEALVRNADTAMYGAKEGGRN 855