Pairwise Alignments

Query, 642 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1228 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) (RefSeq) from Shewanella sp. ANA-3

 Score =  149 bits (377), Expect = 6e-40
 Identities = 92/289 (31%), Positives = 146/289 (50%), Gaps = 12/289 (4%)

Query: 356 LARAAMDGMSAVVITDRQNRIIKVNNEFTRLSGYTFEDVKGKQPSIFASGLHKVEFYMQM 415
           LA+        + I D  + I+ VN+ FT+++GY+ +++ GK      +         Q+
Sbjct: 680 LAQVFQQSGEGITIMDANDIIVDVNSAFTQITGYSRDEIIGKNCRFLEAERTDRSIDAQV 739

Query: 416 WKALQDNGVWEGEVINKRKDGESITEILRIQSIRDEDNVIQFYVASFVDISHRKALENRL 475
             AL+  G W+GEV ++ K+G    + L +  +RDE   I  Y+ SF DIS RK  E R+
Sbjct: 740 RAALEQTGFWQGEVWDRHKEGFDFPKWLMMSIVRDETGAISHYIGSFTDISERKVNEERI 799

Query: 476 RELSEKDALTDLWNRRKFDQTISLECAKRRRYPDQAQSCLAIIDIDHFKRINDKFGHNEG 535
             L+  D+LT L NR        LE   +  +  Q Q  +  ID+DHFK IND  GH+ G
Sbjct: 800 HFLAHHDSLTLLPNRLSLQSR--LEKVFQEAFISQTQIAVMFIDMDHFKNINDTLGHHVG 857

Query: 536 DLVLRTVAKGIQDQLRESDFIARIGGEEFAIIFPYTSIEEAEQVLNRVR--------LHI 587
           D++L  VA+ +++ +   D +AR+GG+EF ++   T  +   +V   +R        +  
Sbjct: 858 DMLLLEVARRLKNIMGNDDIVARLGGDEFVVVLSDTDHDRVAKVAEALRSGLNQTYLIDN 917

Query: 588 ASLHHQ-QVTLSGGVTDVCTSPDQSYKRADLALYESKTSGRNQISVLTA 635
             LH    + +S   TD   S +   K AD+A+Y +K +GRN     TA
Sbjct: 918 KPLHSSPSIGISLFPTD-GDSVEALMKNADMAMYRAKAAGRNNYQFFTA 965