Pairwise Alignments

Query, 642 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 659 a.a., diguanylate cyclase with PAS/PAC sensor (RefSeq) from Shewanella sp. ANA-3

 Score =  126 bits (316), Expect = 4e-33
 Identities = 77/234 (32%), Positives = 121/234 (51%), Gaps = 6/234 (2%)

Query: 349 KNSLDSKLARAAMDGMSAVVITDRQNRIIKVNNEFTRLSGYTFEDVKGKQPSIFASGLHK 408
           K  L + +  A+ DG   ++ITD    II +N  FT ++G T + +         +G   
Sbjct: 375 KLRLAATVFNASTDG---IIITDPLMSIISINQAFTDITGLTEQSLHQDASRFINTGHPN 431

Query: 409 VEFYMQMWKALQDNGVWEGEVINKRKDGESITEILRIQSIRDEDNVIQFYVASFVDISHR 468
            + Y  M   LQ    W+GE+I +   G     + RI ++R+E N +  +V    DIS R
Sbjct: 432 EDAYQAMCNLLQQGEQWQGELIKETASGYLPLSV-RINTVRNEHNRLTHFVIVITDISER 490

Query: 469 KALENRLRELSEKDALTDLWNRRKFDQTISLECAKRRRYPDQAQSCLAIIDIDHFKRIND 528
           KA E  LR ++  DALT+L NR  F   +       +R        +  +D+D+FK +ND
Sbjct: 491 KAEEEHLRHIAHHDALTNLPNRVLFHTKLEQAIVHAQR--SDGIFAILFLDLDNFKPVND 548

Query: 529 KFGHNEGDLVLRTVAKGIQDQLRESDFIARIGGEEFAIIFPYTSIEEAEQVLNR 582
           +FGH+ GD +L+ VAK +   +R+ D I R+GG+EF I+  +   EE+  +L R
Sbjct: 549 EFGHDVGDKLLQEVAKRLTSSIRQIDTITRLGGDEFVILLEHLPNEESVPILIR 602