Pairwise Alignments

Query, 642 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1009 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella sp. ANA-3

 Score =  140 bits (352), Expect = 4e-37
 Identities = 91/290 (31%), Positives = 152/290 (52%), Gaps = 12/290 (4%)

Query: 355 KLARAAMDGMS-AVVITDRQNRIIKVNNEFTRLSGYTFEDVKGKQPSIFASGLHKVEFYM 413
           KL+    D  S A+ + D    II VN  FT ++GY+  +++G+   +    L+   FY 
Sbjct: 456 KLSALVYDNSSEAMSVLDETGVIITVNAAFTAITGYSESEIRGQHIRLLYCDLNGHGFYT 515

Query: 414 QMWKALQDNGVWEGEVINKRKDGESITEILRIQSIRDEDNVIQFYVASFVDISHRKALEN 473
           +M   +++ G W+GE+  +RK+ E     L I +I+D+D      VA F DI+ +K  E+
Sbjct: 516 EMNNEIREKGEWQGEMRQRRKNNEEYVIWLTINTIKDKDGQPYRRVALFSDITDKKQSEH 575

Query: 474 RLRELSEKDALTDLWNRRKFDQTISLECAKRRRYPDQAQSCLAIIDIDHFKRINDKFGHN 533
            + + +  D LT L NRR   + +  E     R  ++    L  +D+D+FK +ND  GH 
Sbjct: 576 LIWKQANYDTLTGLPNRRMLLEYLGAEIKSADR--NRNHFALMFLDLDYFKEVNDTLGHA 633

Query: 534 EGDLVLRTVAKGIQDQLRESDFIARIGGEEFAIIF----PYTSIEE-AEQVLNRV-RLHI 587
            GDL+L   A  ++  +R++D +AR+GG+EF ++      +  IE  AE +L R+   ++
Sbjct: 634 MGDLLLIETASRLKSCVRDADVVARLGGDEFTVVLSSMVDHKGIERVAEHILRRIAEPYV 693

Query: 588 ASLHHQQVTLSGGVT---DVCTSPDQSYKRADLALYESKTSGRNQISVLT 634
                  ++ S G+T   D  TS +   K AD A+Y +K  GRN+ +  T
Sbjct: 694 LGEETAYISASIGITLYPDDATSIEGLLKHADQAMYAAKDQGRNRFNYFT 743