Pairwise Alignments

Query, 642 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1077 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella sp. ANA-3

 Score =  175 bits (444), Expect = 8e-48
 Identities = 99/279 (35%), Positives = 161/279 (57%), Gaps = 13/279 (4%)

Query: 367 VVITDRQNRIIKVNNEFTRLSGYTFEDVKGKQPSIFASGLHKVEFYMQMWKALQDNGVWE 426
           +++TD  N I  +N  F++++GY+ E+VKG+ PSI +S  H   +Y  MW+AL   G WE
Sbjct: 522 IMVTDADNHIELINPAFSQITGYSLEEVKGRSPSILSSNRHPHHYYTAMWEALHKEGKWE 581

Query: 427 GEVINKRKDGESITEILRIQSIRDEDNVIQFYVASFVDISHRKALENRLRELSEKDALTD 486
           GE+ NKRKDG+   E L I  +R+E   I  ++  F+DIS RK  E  L   +  D LT 
Sbjct: 582 GEIWNKRKDGQVYPEYLAITVVRNEQGEIIQHIGLFMDISKRKQYEQDLWYQANFDTLTG 641

Query: 487 LWNRRKFDQTISLECAKRRRYPDQAQSCLAIIDIDHFKRINDKFGHNEGDLVLRTVAKGI 546
           L NR+ F++ +  E    +   D  +  + +ID+D FK IND  GH  GDL+L+ VAK +
Sbjct: 642 LPNRKLFNERLQHEIQLAQH--DSRKLAILLIDLDQFKYINDVQGHATGDLLLQDVAKRL 699

Query: 547 QDQLRESDFIARIGGEEFAIIFPYTSIEEA-EQVLNRVRLHIA---SLHHQQVTLSGGVT 602
           ++   ++DF+ARIGG+EF +I P  + E A E + +R+   +A   +L+ +++ +S    
Sbjct: 700 ENIAGKNDFVARIGGDEFVLILPRVTNEFAIEHMASRIIETLATPFNLNEREIQISASF- 758

Query: 603 DVCTSPDQSY------KRADLALYESKTSGRNQISVLTA 635
            +   P+         +  ++A+Y++K +GRN     T+
Sbjct: 759 GIGVYPEDGLDVSSLTRNTEMAMYQAKDAGRNNFKYFTS 797