Pairwise Alignments

Query, 612 a.a., protein translocase subunit SecD from Vibrio cholerae E7946 ATCC 55056

Subject, 844 a.a., preprotein translocase subunit SecD/SecF from Sinorhizobium meliloti 1021

 Score =  274 bits (700), Expect = 1e-77
 Identities = 168/495 (33%), Positives = 279/495 (56%), Gaps = 37/495 (7%)

Query: 127 LGFSPIKLGLDLRGGVQFLLNVDVDKAFQEQRDSMMDAVKDSLRAERLRGVVVQAMGNDA 186
           L F P+ LGLDLRGG   +L VD     + + +S++D  +  LR ER+     +  GN  
Sbjct: 39  LPFEPVTLGLDLRGGSHLVLEVDGAGLQKARLNSLLDDTRRVLRGERVSASSARISGNSV 98

Query: 187 FEVKTEQPQALSHVRKYLQE-----NYRGW-------EIRQGSDQLQVQPSQQNKSEFQT 234
             V     Q    V   LQE     +  G+       E+    D + +  ++   ++  T
Sbjct: 99  -TVSIPDAQDRDKVLPKLQELATPVSTVGFAAPAPEVEVTTAGDVITLAMTEAGLADRMT 157

Query: 235 ATIQQNLKIMRDRIEELGITEALVQRQGEHAIRIELPGVQDPSQAKNVIGATASLAFYEA 294
             ++Q+L+I+R+R++++G+ E L+QR G + I ++LPG+QDP++ + ++G+TA ++F+  
Sbjct: 158 KAVEQSLEIIRNRVDQVGVAEPLIQRIGSNRILVQLPGLQDPTRLRELLGSTAQMSFHML 217

Query: 295 KSPTDA-----RSYDDLI-LEDGNGRPVILAKRPVLSGEHIVNARAGVDNM-GMSEVNIS 347
               D      R  D L    DGN  PV    R  +SGE + +A+ G D       V+ S
Sbjct: 218 DQSVDVTQPAPRGVDILPGANDGNRYPV--ESRVAISGERLDDAKVGFDQRTNQPVVDFS 275

Query: 348 LDHAGGKIMSDFSGKHIGKPMATVYREYKTNARGETVRSEKVISVATIQSQ-LGSQFRIT 406
            D  G +  +D + +++G+P A V                KV++   I    LG + +I+
Sbjct: 276 FDSLGARQFADITRENVGRPFAIVL-------------DGKVLTAPVINEPILGGRGQIS 322

Query: 407 GAGSMEEAQQLALLLRAGSLTAPVTIVEERTIGASLGEENIANGFAALALGMAMTLTFMA 466
           G+ ++EEA  L+ LLR+G+L AP+TI+EER++G +LG ++I  G      G  + +  M 
Sbjct: 323 GSFTVEEATVLSALLRSGALPAPLTIIEERSVGPNLGSDSIRMGLFTGLAGFGLVVVLMV 382

Query: 467 LWYRRLGWVANVALLVNMACLLGLIALLPGAVLTLPGIAGLVLTVGMAVDTNVLIFERIR 526
           + Y   G +ANV L+++    +G++ L+ G+ LTLPGIAG++L +GMAVD N+LI  RIR
Sbjct: 383 VLYGAWGMIANVGLVLHTIMTIGVLGLI-GSTLTLPGIAGIILGIGMAVDANILINARIR 441

Query: 527 DKLSEGRNFAQAIDTGFDSAFSTILDANITTMITAVILYSIGNGPIQGFALTLGLGLLTS 586
           ++   G    +A+D GF+ A++TI+D+N+TT+   V+L+  G+GP++GFA+T+ LG+  S
Sbjct: 442 EETEAGAGAMKALDIGFNKAYATIIDSNVTTLAGTVLLFWFGSGPVKGFAVTMMLGIGIS 501

Query: 587 MFSGVFASRALINLV 601
           MF+ V   R L+  V
Sbjct: 502 MFTSVTVVRLLMREV 516