Pairwise Alignments

Query, 612 a.a., protein translocase subunit SecD from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., protein-export membrane protein SecF from Phaeobacter inhibens DSM 17395

 Score = 63.9 bits (154), Expect = 1e-14
 Identities = 63/276 (22%), Positives = 121/276 (43%), Gaps = 16/276 (5%)

Query: 335 GVDNMGMSEVNISLDHAGGKIMSDFSGKHIGKPMATVYREYKTNARGETVRSEKVISVAT 394
           G  +  +  +N  +D  GG  +   S   I   + T     +    G+   SE V     
Sbjct: 32  GFASFALQGLNFGIDFRGGTTIRTESTTEID--VGTYRAALEPLELGDITISE-VFDPTF 88

Query: 395 IQSQLGSQFRITGAGSMEE--AQQLALLLRAGSLTAP-VTIVEERTIGASLGEENIANGF 451
            + Q  +  RI      E    + +A +  A    AP +  V   ++G  +  E +    
Sbjct: 89  AEDQHVAMVRIQAQADGESISGEVIADVNAALDAVAPGIKFVSVESVGPKVSGELVQTAV 148

Query: 452 AALALGMAMTLTFMAL---WYRRLGWVANVALLVNMACLLGLIALLPGAVLTLPGIAGLV 508
            A+AL +   L ++ L   W   LG VA  AL+ ++   +G+ + L      L  IA L+
Sbjct: 149 LAVALAIGAVLIYIWLRFEWQFALGAVA--ALVHDVVLTIGVFSELQ-IKFDLAIIAALL 205

Query: 509 LTVGMAVDTNVLIFERIRDKLSEGRN--FAQAIDTGFDSAFSTILDANITTMITAVILYS 566
             VG +++  V++F+R+R+ L   +    A+ ++   +   S  +  ++TT++  + LY 
Sbjct: 206 TIVGYSLNDTVVVFDRVRENLRRYKKKPLAEVLNISINETLSRTVMTSVTTLLALISLYV 265

Query: 567 IGNGPIQGFALTLGLGLLTSMFSGVFASRALINLVW 602
           +G   I+GF   +  G++   +S +F +  +  L+W
Sbjct: 266 LGGDVIRGFVFAMIWGVIIGTYSSIFVASTI--LLW 299