Pairwise Alignments

Query, 612 a.a., protein translocase subunit SecD from Vibrio cholerae E7946 ATCC 55056

Subject, 622 a.a., protein-export membrane protein, SecD/SecF family from Dechlorosoma suillum PS

 Score =  363 bits (932), Expect = e-104
 Identities = 227/618 (36%), Positives = 346/618 (55%), Gaps = 34/618 (5%)

Query: 14  INHYSAWKYVVLVTTIIILTLSAIPTWYGEQPSIQLQSKDAT--SVLRNVPELTQLLNKQ 71
           +N Y  WKY+ +V  ++I  L  +P ++GE P++QL    AT  +  + +  +   L   
Sbjct: 1   MNRYPLWKYITVVVALVIGFLYTLPNFFGEAPAVQLSPARATLKTDAQLLSRVEAALQGA 60

Query: 72  NIQADEITQQGDNTTLVFANETQQSQARNALDALVKEGD-----TITYSYVSVAPKWLGN 126
            I  D I    +     F +   Q + ++ L+             +  + +S +PKWL N
Sbjct: 61  GISHDGIFLDSNGVKTRFKDTDTQLKVKDLLEKTFNPNPQDAQYVVALNLLSSSPKWLSN 120

Query: 127 LGFSPIKLGLDLRGGVQFLLNVDVDKAFQEQRDSMMDAVKDSLRAERLRGVVVQAMGNDA 186
           LG  P+ LGLDLRGGV FLL VD+  A  ++ DSM   ++  LR + LR   +   GN A
Sbjct: 121 LGALPMYLGLDLRGGVHFLLQVDMAGALTKRLDSMSADLRTLLRDKNLRHAGINREGN-A 179

Query: 187 FEVKTEQPQALSHVRKYLQENYRGWEIRQGSDQLQVQPSQQNK----SEFQTATIQQNLK 242
             VK       +  R  L++N        G D   ++ +   K       Q   ++QN+ 
Sbjct: 180 VVVKFRDADTRTKARIVLEDNQPDLTFVDGQDGSDLKLTASLKPTAVKRIQDFALKQNIT 239

Query: 243 IMRDRIEELGITEALVQRQGEHAIRIELPGVQDPSQAKNVIGATASLAF---------YE 293
            + +RI ELG+ E ++Q+QG   I ++LPGVQD ++AK+++G TA+L            E
Sbjct: 240 TLHNRINELGVAEPVIQQQGADRIVVQLPGVQDTAKAKDILGRTATLEIRMVDDTPGALE 299

Query: 294 AKSPTDARSYDDLILEDGNGRPVILAKRPVLSGEHIVNARAGVDNMGMSE-VNISLDHAG 352
           A     A    +L  E G G P+++ K+ VL+G+ + +A+ G D       V+++LD AG
Sbjct: 300 AAMAGQAPFGTELYSERG-GSPLLVKKQVVLTGDRLTDAQPGFDGQTHEPAVHLTLDSAG 358

Query: 353 GKIMSDFSGKHIGKPMATVYREYKTNARGETVRSEKVISVATIQSQLGS-QFRITGAGSM 411
            +I  D + +++GK MA +  E     +GE      V++   I++++G  + +I+G  S 
Sbjct: 359 ARIFKDITRENVGKRMAILLIE---KGKGE------VVTAPVIRTEIGGGRVQISGKMST 409

Query: 412 EEAQQLALLLRAGSLTAPVTIVEERTIGASLGEENIANGFAALALGMAMTLTFMALWYRR 471
            EA   ALLLRAGSL AP+ IVEERTIG SLG +NI+ GF +   G      FM  +Y  
Sbjct: 410 MEANDTALLLRAGSLAAPMDIVEERTIGPSLGADNISKGFHSTLWGFLAIAAFMMCYYLM 469

Query: 472 LGWVANVALLVNMACLLGLIALLPGAVLTLPGIAGLVLTVGMAVDTNVLIFERIRDKLSE 531
            G ++ +AL  N+  L+ L++L+  A LTLPGIA + LT+GMA+D+NVLI ER+R++L  
Sbjct: 470 FGLISTLALAANLMFLVALLSLMQ-ATLTLPGIAAIALTLGMAIDSNVLINERVREELRN 528

Query: 532 GRNFAQAIDTGFDSAFSTILDANITTMITAVILYSIGNGPIQGFALTLGLGLLTSMFSGV 591
           G +   AI  G++ AF TILD+N+TT+I  V L + G+GPI+GFA+   LG+LTSMFS V
Sbjct: 529 GASPQAAISAGYERAFGTILDSNVTTLIAGVALLAFGSGPIRGFAVVHCLGILTSMFSSV 588

Query: 592 FASRALINLVWGRDTRRD 609
             SRAL+NL++GR  + D
Sbjct: 589 VVSRALVNLIYGRRKKLD 606