Pairwise Alignments

Query, 612 a.a., protein translocase subunit SecD from Vibrio cholerae E7946 ATCC 55056

Subject, 361 a.a., preprotein translocase subunit SecF (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 64.3 bits (155), Expect = 8e-15
 Identities = 45/179 (25%), Positives = 89/179 (49%), Gaps = 15/179 (8%)

Query: 434 EERTIGASLGEENIANGFAALAL---------GMAMTLTFMALWYRRLGWV--ANVALLV 482
           E R + +++    +A G   L L           ++ LT +  W  RL +   A VAL+ 
Sbjct: 162 ERRWMASAVMAGTLAGGMYLLGLVGVPRLWLVPFSLVLTLVLCWKLRLNFALGAIVALVH 221

Query: 483 NMACLLGLIALLPGAVLTLPGIAGLVLTVGMAVDTNVLIFERIRDKLSEGRN---FAQAI 539
           ++   +G+++LL   V  L  +A ++  VG +++  +++++RIR+ L   R    +A  I
Sbjct: 222 DVLITMGVLSLLNKEV-DLNIVAAILTLVGYSLNDTIIVYDRIRETLRTHRKEWTYAHII 280

Query: 540 DTGFDSAFSTILDANITTMITAVILYSIGNGPIQGFALTLGLGLLTSMFSGVFASRALI 598
           +   +   S  +    TT++  + LY +G G I  FALT+ +G+   + S +F +  ++
Sbjct: 281 NASINQTLSRTILTGGTTLVVILALYVLGGGVIHDFALTMLVGVFVGILSSIFVASPVL 339