Pairwise Alignments

Query, 612 a.a., protein translocase subunit SecD from Vibrio cholerae E7946 ATCC 55056

Subject, 362 a.a., protein-export membrane protein SecF (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 58.5 bits (140), Expect = 5e-13
 Identities = 40/151 (26%), Positives = 79/151 (52%), Gaps = 6/151 (3%)

Query: 458 MAMTLTFMALWYRRLGWV--ANVALLVNMACLLGLIALLPGAVLTLPGIAGLVLTVGMAV 515
           +++ +T    W  +L +   A +ALL ++   +GL++LL G    L  IA L+  +G ++
Sbjct: 195 VSLLVTVALCWKLKLNFALGAIIALLHDVLISIGLLSLL-GKEFDLNIIAALLTLIGYSL 253

Query: 516 DTNVLIFERIRDKLSEGRN--FAQAIDTGFDSAFSTILDANITTMITAVILYSIGNGPIQ 573
           +  +++++RIR+ L    +  F   I+   +   S  +    TT++  V L+ +G G I 
Sbjct: 254 NDTIIVYDRIRETLRTNPDDPFDVIINRSINQTLSRTILTGGTTLMVIVSLFFLGGGVIH 313

Query: 574 GFALTLGLGLLTSMFSGVFASRALINLVWGR 604
            FALT+  G+     S +F +  ++ L +G+
Sbjct: 314 DFALTMFFGVFIGTLSSIFVASPVL-LAFGK 343