Pairwise Alignments

Query, 300 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 622 a.a., Protein-export membrane protein SecD (TC 3.A.5.1.1) from Xanthomonas campestris pv. campestris strain 8004

 Score = 62.0 bits (149), Expect = 3e-14
 Identities = 49/176 (27%), Positives = 91/176 (51%), Gaps = 15/176 (8%)

Query: 111 VQIVSNSMVGSQVGQELIDQGGLALLICLLSILAYLS--FRFEWRLASGALLALLHDVIL 168
           +  V   ++G  +G E +++G  A++   +  L + +  +R    + S ALL  L  VI 
Sbjct: 440 MDFVEEYVIGPSLGAENVERGVTAVVFSFVFTLVFFTVYYRMFGAITSVALLFNLLIVIA 499

Query: 169 VLGFFAITQMEFNLTVFAAVLAVLGYSLNDSIIISDRIRELLLAKQQTPTADINDQAIIA 228
           V+  F  T     L  FA +   +G S++ +++I++RIRE L  +   P       AI+A
Sbjct: 500 VMSLFGATM---TLPGFAGLALSVGLSVDANVLINERIREEL--RLGVPPKS----AIVA 550

Query: 229 TFSR---TMVTSGTTLMTIS-ALWLMGGAPLQGFAIAMFIGIISGTWSSISIGTVL 280
            + +   T++ +  T + +  AL+  G  PL+GFA+ M IGI +  +++I++   L
Sbjct: 551 GYEKAGGTILDANLTGLIVGVALYAFGTGPLKGFALTMIIGIFASMFTAITVSRAL 606