Pairwise Alignments

Query, 300 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., preprotein translocase subunit SecF from Synechococcus elongatus PCC 7942

 Score =  129 bits (324), Expect = 9e-35
 Identities = 93/287 (32%), Positives = 148/287 (51%), Gaps = 25/287 (8%)

Query: 19  ISVLLMVISLGAFAIKGLNMG------LDFTGGMVTEAIINHSVTKSQLMDQLQPVLGES 72
           IS +L+++S+   AI  L  G      LDF GG  T   +    TK+Q    L+      
Sbjct: 15  ISAILVIVSIAGMAISWLQFGGPVRPGLDFVGG--TRLQLERDCTKAQCDRPLEAGAIRE 72

Query: 73  VSATPSGEE------GRWVIRYPLAAEDATPVDIATELHH-ISDQV-----QIVSNSMVG 120
           V  +   E       G+    + ++  D +P +  T+L + +S+Q      Q      VG
Sbjct: 73  VLTSAGLERSNVQVIGQEQQGFVISTGDLSP-EARTQLQNKLSEQFGPFDPQQTQIDTVG 131

Query: 121 SQVGQELIDQGGLALLICLLSILAYLSFRFEWRLASGALLALLHDVILVLGFFA----IT 176
             +GQ+L+  G LALL+    IL YL+FRF+   A  A+LAL HDV +  G FA    + 
Sbjct: 132 PVLGQQLLSSGLLALLVSFAGILVYLNFRFQRDYALLAILALFHDVFITAGVFAWLGILA 191

Query: 177 QMEFNLTVFAAVLAVLGYSLNDSIIISDRIRELLLAKQQTPTADINDQAIIATFSRTMVT 236
             E +     A+L + G+S+ND+++I DRIRE      +    +I D ++  T  R++ T
Sbjct: 192 GYEADSLFIVALLTITGFSVNDTVVIYDRIRETNSLFPEDDIDEIVDLSVNQTLGRSINT 251

Query: 237 SGTTLMTISALWLMGGAPLQGFAIAMFIGIISGTWSSISIGTVLPEW 283
           + TTL+ + ++++ GGA LQ FA+A+ +G + G +SSI I + L  W
Sbjct: 252 TLTTLLPLISIYIFGGATLQNFALALIVGFVLGAYSSIFIASTLLGW 298