Pairwise Alignments

Query, 300 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 858 a.a., preprotein translocase subunit SecD/SecF from Sinorhizobium meliloti 1021

 Score =  147 bits (371), Expect = 9e-40
 Identities = 97/273 (35%), Positives = 146/273 (53%), Gaps = 4/273 (1%)

Query: 8   RIRPIRYITGIISVLLMVISLGAFAIKGLNMGLDFTGGMVTEAIINHSVTK-SQLMDQLQ 66
           R   IR    I+   L + SL      GLNMG DF GG V E      V   + +  +L 
Sbjct: 550 RFMAIRNPVFILMTALSLASLVLLTSLGLNMGADFRGGSVIELRARTGVADGADIRARLD 609

Query: 67  PVLGESVSATPSGEEGRWVIRYPL--AAEDATPVDIATELHHISDQVQIVSNSMVGSQVG 124
            +    V     G     ++R P   A ++A    +      + DQ       +VG  V 
Sbjct: 610 ELNLGDVQVEELGSARDVLVRIPSQEAGDNAEQTAVGLVRSELEDQYVFRRVEVVGPGVS 669

Query: 125 QELIDQGGLALLICLLSILAYLSFRFEWRLASGALLALLHDVILVLGFFAITQMEFNLTV 184
            EL   G LA+   +L++L Y+  RF  R A GA++A LHDV+L LGF  +T +EFNL  
Sbjct: 670 GELTRAGSLAVAAAVLAVLLYVWLRFGRRFAVGAIVATLHDVLLTLGFLVLTGIEFNLAS 729

Query: 185 FAAVLAVLGYSLNDSIIISDRIRELLLAKQQTPTADINDQAIIATFSRTMVTSGTTLMTI 244
            AA+L ++ YSL+D+++I DR+RE L+  ++ P + + D +I  T SRT++T+ TTL+ +
Sbjct: 730 IAALLTIVCYSLSDTMVIYDRVRENLVRYRRMPLSVLIDTSINQTLSRTVLTAVTTLLAL 789

Query: 245 SALWLMGGAPL-QGFAIAMFIGIISGTWSSISI 276
            AL+L GG+ L Q F+  +  G++ GT SSI +
Sbjct: 790 VALYLFGGSGLVQSFSATLIFGVLVGTVSSIYV 822