Pairwise Alignments

Query, 300 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 611 a.a., protein-export membrane protein SecD (RefSeq) from Shewanella amazonensis SB2B

 Score = 67.4 bits (163), Expect = 8e-16
 Identities = 46/193 (23%), Positives = 99/193 (51%), Gaps = 4/193 (2%)

Query: 93  EDATPVDIATELHHISDQVQIVSNSMVGSQVGQELIDQGGLALLICLLSILAYLSFRFEW 152
           E+A  + +      ++  V I     +G  +G E I  G  AL + + + L +++  +  
Sbjct: 411 EEAQELAMLLRAGSMTAPVTIQKERTIGPSLGAENIHNGFAALALGMGATLLFMALWYR- 469

Query: 153 RLASGALLALLHDVILVLGFFA-ITQMEFNLTVFAAVLAVLGYSLNDSIIISDRIRELLL 211
           RL   A +ALL +++++LG  A I      L   A ++  +G +++ +++I +RIR+ + 
Sbjct: 470 RLGWVANVALLANLVMLLGLLALIPGAVLTLPGIAGLVLTVGMAVDTNVLIFERIRDKM- 528

Query: 212 AKQQTPTADINDQAIIATFSRTMVTSGTTLMTISALWLMGGAPLQGFAIAMFIGIISGTW 271
            K+    A   D+   + F   +  + TT++T   L+ +G  P+QGFA+ + +G+++   
Sbjct: 529 -KEGRSLALAIDKGFASAFGTIVDANLTTMITALVLYAIGNGPIQGFALTLGLGLVTSMI 587

Query: 272 SSISIGTVLPEWL 284
           + I +  ++  W+
Sbjct: 588 TGIFMSRLIINWV 600