Pairwise Alignments

Query, 300 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., protein-export membrane protein SecF (RefSeq) from Shewanella amazonensis SB2B

 Score =  299 bits (766), Expect = 5e-86
 Identities = 155/279 (55%), Positives = 205/279 (73%), Gaps = 1/279 (0%)

Query: 13  RYITGIISVLLMVISLGAFAIKGLNMGLDFTGGMVTEAIINHSVTKSQLMDQLQPVLGES 72
           R++  +ISV+ +++S+ A + +G N+GLDFTGG   E  +    T+   ++     LG+ 
Sbjct: 10  RHLMTLISVVALLLSVLAISTRGFNLGLDFTGGAFAEVAMATD-TRIDEVETALAHLGDG 68

Query: 73  VSATPSGEEGRWVIRYPLAAEDATPVDIATELHHISDQVQIVSNSMVGSQVGQELIDQGG 132
             +  + E GR++IR     +  T  D    L  +   +Q++    V  QVGQEL +QGG
Sbjct: 69  SISVVATEPGRFLIRMGGTLDAHTLADFNQSLLQLDPTMQVLDRDSVSPQVGQELFEQGG 128

Query: 133 LALLICLLSILAYLSFRFEWRLASGALLALLHDVILVLGFFAITQMEFNLTVFAAVLAVL 192
           LALLI +L IL YLS RFEWRLA+GAL+AL+HDV+LVLG FA+T MEFNLTV AAVLAVL
Sbjct: 129 LALLIAMLCILGYLSLRFEWRLAAGALVALVHDVVLVLGVFALTGMEFNLTVLAAVLAVL 188

Query: 193 GYSLNDSIIISDRIRELLLAKQQTPTADINDQAIIATFSRTMVTSGTTLMTISALWLMGG 252
           GYSLNDSIII+DRIRELLLA+ ++   ++ND AI+ TFSRTMVTSGTTL+T+ ALWL+GG
Sbjct: 189 GYSLNDSIIIADRIRELLLARPKSRLTEVNDAAIVQTFSRTMVTSGTTLITVGALWLLGG 248

Query: 253 APLQGFAIAMFIGIISGTWSSISIGTVLPEWLGLESKHY 291
           APL+GFA+AMF+GI++GT+SS+S+GTVLPE LGL   HY
Sbjct: 249 APLEGFAVAMFVGIVTGTFSSVSVGTVLPELLGLSPAHY 287