Pairwise Alignments

Query, 300 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 351 a.a., SecF protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  167 bits (422), Expect = 4e-46
 Identities = 101/277 (36%), Positives = 157/277 (56%), Gaps = 8/277 (2%)

Query: 3   DYLKSRIRPIRYITGIISVLLMVISLGAFAIKGLNMGLDFTGGMVTEAIINHSVTKSQLM 62
           D+L SR R +       S  L+++ L A  ++GL++G+DFTGG+V EA    ++    L 
Sbjct: 15  DFLVSRARVMA-----ASAALLLVCLLALGLRGLDLGIDFTGGLVVEARTATAMDPVDLR 69

Query: 63  DQLQPVLGESVSATPSGEEGRWV---IRYPLAAEDATPVDIATELHHISDQVQIVSNSMV 119
             L+  +   V  T  GE+GR V   +      + A    +      + +       ++V
Sbjct: 70  QSLRASVVGEVDVTTYGEDGRSVTVRVGRQTGGDQAMLQALEGVKTALGEGATYRRTNLV 129

Query: 120 GSQVGQELIDQGGLALLICLLSILAYLSFRFEWRLASGALLALLHDVILVLGFFAITQME 179
           G  VG E    G L + + L+ I AY+  RF+W  A G +LAL HDV+ VLG +A+ Q+ 
Sbjct: 130 GPTVGGEATIAGLLTVALALVLIAAYVWLRFDWHYALGVVLALSHDVVAVLGLYALFQIP 189

Query: 180 FNLTVFAAVLAVLGYSLNDSIIISDRIRELLLAKQQTPTADINDQAIIATFSRTMVTSGT 239
           F+LT  AA+L V  YS+ND+++I DR+RE L      P A + +++I  T +RT+V SG+
Sbjct: 190 FDLTSIAALLTVACYSINDTVVIFDRVREELALTPDAPLATVVNKSINRTLARTIVLSGS 249

Query: 240 TLMTISALWLMGGAPLQGFAIAMFIGIISGTWSSISI 276
           TL+T++ L L+GG  L+GFA+A+  G + GT SSI +
Sbjct: 250 TLVTMACLALLGGPQLRGFALALIWGTVVGTLSSIYV 286