Pairwise Alignments

Query, 300 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., protein-export membrane protein SecF from Phaeobacter inhibens DSM 17395

 Score =  176 bits (447), Expect = 5e-49
 Identities = 98/280 (35%), Positives = 168/280 (60%), Gaps = 11/280 (3%)

Query: 19  ISVLLMVISLGAFAIKGLNMGLDFTGGMVTEAIINHSVTKSQLMDQLQPV-LGE---SVS 74
           IS L++V+   +FA++GLN G+DF GG          +        L+P+ LG+   S  
Sbjct: 24  ISALMIVVGFASFALQGLNFGIDFRGGTTIRTESTTEIDVGTYRAALEPLELGDITISEV 83

Query: 75  ATPSGEEGRWVIRYPLAAE-DATPV------DIATELHHISDQVQIVSNSMVGSQVGQEL 127
             P+  E + V    + A+ D   +      D+   L  ++  ++ VS   VG +V  EL
Sbjct: 84  FDPTFAEDQHVAMVRIQAQADGESISGEVIADVNAALDAVAPGIKFVSVESVGPKVSGEL 143

Query: 128 IDQGGLALLICLLSILAYLSFRFEWRLASGALLALLHDVILVLGFFAITQMEFNLTVFAA 187
           +    LA+ + + ++L Y+  RFEW+ A GA+ AL+HDV+L +G F+  Q++F+L + AA
Sbjct: 144 VQTAVLAVALAIGAVLIYIWLRFEWQFALGAVAALVHDVVLTIGVFSELQIKFDLAIIAA 203

Query: 188 VLAVLGYSLNDSIIISDRIRELLLAKQQTPTADINDQAIIATFSRTMVTSGTTLMTISAL 247
           +L ++GYSLND++++ DR+RE L   ++ P A++ + +I  T SRT++TS TTL+ + +L
Sbjct: 204 LLTIVGYSLNDTVVVFDRVRENLRRYKKKPLAEVLNISINETLSRTVMTSVTTLLALISL 263

Query: 248 WLMGGAPLQGFAIAMFIGIISGTWSSISIGTVLPEWLGLE 287
           +++GG  ++GF  AM  G+I GT+SSI + + +  WLG++
Sbjct: 264 YVLGGDVIRGFVFAMIWGVIIGTYSSIFVASTILLWLGVK 303