Pairwise Alignments

Query, 300 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 532 a.a., preprotein translocase subunit SecD (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 69.7 bits (169), Expect = 1e-16
 Identities = 61/237 (25%), Positives = 116/237 (48%), Gaps = 12/237 (5%)

Query: 56  VTKSQLMDQLQPVLGESVSATPSGEE----GRWVIRYPLAAEDATPVDIATELHHISDQV 111
           +T+  +  +L  VL   V + P  +E    GR  I    +  +A  + I      +   V
Sbjct: 292 ITQENVRKRLAIVLDGKVYSAPVIQEKIGGGRASITGKFSTAEAQDLAIVLRAGSLPAPV 351

Query: 112 QIVSNSMVGSQVGQELIDQGGLALLICLLSILAYLSFRFEWRLASGAL--LALLHDVILV 169
            ++    VG  +GQE ID+G LA ++   +++ ++   +     SG +  + L   V+L+
Sbjct: 352 SVLEERTVGPSLGQESIDKGILAAVVGGAAVMIFMVVYYG---VSGLIADVMLCFTVLLI 408

Query: 170 LGFFAITQMEFNLTVFAAVLAVLGYSLNDSIIISDRIRELLLAKQQTPTADINDQAIIAT 229
           L   A       L   A ++  LG +++ +++I +RIRE L  K  T  + I++    AT
Sbjct: 409 LAGMAAFGATLTLPGLAGIVLTLGMAVDANVLIYERIREEL-RKGHTVLSAIHEGFDRAT 467

Query: 230 FSRTMVTSGTTLMTISALWLMGGAPLQGFAIAMFIGIISGTWSSISIG-TVLPEWLG 285
            + T  ++ TT++  + L+  G  P++GFA+ + +GII+  +++I +   V   W G
Sbjct: 468 LAITD-SNLTTIIASAILYQFGTGPVRGFAVTLSLGIIASMFTAIFVSRVVFQAWKG 523