Pairwise Alignments

Query, 300 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 281 a.a., protein translocase subunit SecF from Methanococcus maripaludis S2

 Score = 59.3 bits (142), Expect = 1e-13
 Identities = 61/271 (22%), Positives = 122/271 (45%), Gaps = 34/271 (12%)

Query: 18  IISVLLMVISLGAFAIKGLNMGLDFTGG----MVTEAIINHSVTKSQLMDQLQPVLGESV 73
           II ++L ++SL   ++ GL   +D +GG    ++  A  + SV K QL D    +   S+
Sbjct: 10  IIPIILALLSLTLVSVNGLKESIDVSGGTEISILAPANTDLSVLKEQLPDSEVKISESSI 69

Query: 74  SATPSGEEGRWVIRYPLAAEDATPVDIATELHHISDQVQI-VSNSMVGSQVGQELIDQG- 131
                      VI+  L  +  +   +  E  ++ D  ++  +   +GS +  +  ++G 
Sbjct: 70  GTFV-------VIKSGLETDVDSVRAVVKEFFNVEDLSELSYTEKQIGSVLSSKFWEEGM 122

Query: 132 -GLALLICLLSILAYLSFRFEWRLASGA-LLALLHDVILVLGFFAITQMEFNLTVFAAVL 189
             +      ++I+ Y  FR    + SGA +LA   D+ + +G  ++  +  +    AA+L
Sbjct: 123 KAVGFAFIFMAIVVYAIFRTP--VPSGAVILAAASDMAIAVGGMSLFNIPISTATIAALL 180

Query: 190 AVLGYSLNDSIIISDRIRELLLAKQQTPTADINDQAIIATFSRTMVTSGTTLMTISALWL 249
            ++GYS++  I+++ R+      K+++ T    D+ I       +  S TT+  ++ L+L
Sbjct: 181 MLVGYSVDTDIMLTTRV-----LKRRSGTL---DERIAGAMKTGITMSLTTIFAMAVLYL 232

Query: 250 M------GGAPLQGFAIAMFIGIISG---TW 271
           +          L   A  + IG+I     TW
Sbjct: 233 VVTFVVPAADVLANIAAVLLIGLIGDLMLTW 263