Pairwise Alignments

Query, 300 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 532 a.a., protein-export membrane protein SecD (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 72.4 bits (176), Expect = 2e-17
 Identities = 69/256 (26%), Positives = 118/256 (46%), Gaps = 20/256 (7%)

Query: 50  AIINHSVTKSQLMDQLQPVLGESVSATPSGEE----GRWVIRYPLAAEDATPVDIATELH 105
           A I   VT   +  +L  VL   V + PS +E    GR  I      E+A  + I     
Sbjct: 286 AAIFERVTGENVRKRLAIVLDGKVYSAPSIQEKIAGGRASITGHFTTEEAQDLAIVLRAG 345

Query: 106 HISDQVQIVSNSMVGSQVGQELIDQGGLALLICLLSILAYLSFRFEWRLASGALLA--LL 163
            +   V ++    VG  +GQE ID G LA  +   +++ +    +    ASGA+    L 
Sbjct: 346 SLPAPVNVLEERTVGPSLGQESIDSGILAGQVGGAAVVVFTILYYG---ASGAIAVGMLC 402

Query: 164 HDVILVLGFFAITQMEFNLTVFAAVLAVLGYSLNDSIIISDRIRELLLAKQQTPTADIND 223
             ++L+L   A       L   A +   +G  ++ +++I +RIRE L  +  TP A    
Sbjct: 403 FTILLILAGMAGFGATLTLPGLAGIALTIGMGVDANVLIYERIREEL-RRGLTPLA---- 457

Query: 224 QAIIATFSRTMVT----SGTTLMTISALWLMGGAPLQGFAIAMFIGIISGTWSSISIG-T 278
            AI A F R M++    + TT++  + L+  G  P++GFA+ + +GI++  +++I +   
Sbjct: 458 -AIHAGFDRAMLSITDSNLTTVIAAAILYQFGTGPVRGFAVTLTLGILASMFTAIFVSRA 516

Query: 279 VLPEWLGLESKHYLPV 294
           V   W+ L     L +
Sbjct: 517 VFDLWMRLSPSKRLSI 532