Pairwise Alignments

Query, 300 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 362 a.a., protein-export membrane protein SecF (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  136 bits (342), Expect = 8e-37
 Identities = 102/322 (31%), Positives = 155/322 (48%), Gaps = 58/322 (18%)

Query: 12  IRYITGIISVLLMVISLGAFAIKG-LNMGLDFTGGMVTEAIINHSVT----KSQLMDQLQ 66
           +R I  ++S+++++I   + A+ G L  G+DF GG V +   +  V     K  L D   
Sbjct: 17  MRRIAYVLSIVVILIGFASIAMNGGLRYGIDFAGGAVVQVKFDKPVEDEAIKKSLADADL 76

Query: 67  PVLGESVSATPSGEEGRWVIRYPLAAEDATPV--DIATELHHISDQVQIVSN--SMVGSQ 122
           P  G S+     G+E  ++IR       A  +   ++T L      V        MVG +
Sbjct: 77  P--GLSIQRFGEGDED-YLIRISDTGSSADSIRQTVSTALQQNLKDVSFTVQRLEMVGPK 133

Query: 123 VGQELIDQGGLALLICLLSILAYLSFRFE------------------------------- 151
           VG +L  +   AL   +L I  Y+S RFE                               
Sbjct: 134 VGADLRSKAVEALYYAVLLIAVYISGRFEQRWMASAVMAATLWGGMYLLSAIGLGREWLV 193

Query: 152 -----------WRL----ASGALLALLHDVILVLGFFAITQMEFNLTVFAAVLAVLGYSL 196
                      W+L    A GA++ALLHDV++ +G  ++   EF+L + AA+L ++GYSL
Sbjct: 194 FVSLLVTVALCWKLKLNFALGAIIALLHDVLISIGLLSLLGKEFDLNIIAALLTLIGYSL 253

Query: 197 NDSIIISDRIRELLLAKQQTPTADINDQAIIATFSRTMVTSGTTLMTISALWLMGGAPLQ 256
           ND+II+ DRIRE L      P   I +++I  T SRT++T GTTLM I +L+ +GG  + 
Sbjct: 254 NDTIIVYDRIRETLRTNPDDPFDVIINRSINQTLSRTILTGGTTLMVIVSLFFLGGGVIH 313

Query: 257 GFAIAMFIGIISGTWSSISIGT 278
            FA+ MF G+  GT SSI + +
Sbjct: 314 DFALTMFFGVFIGTLSSIFVAS 335