Pairwise Alignments

Query, 300 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 687 a.a., preprotein translocase subunit SecD from Burkholderia phytofirmans PsJN

 Score = 64.3 bits (155), Expect = 8e-15
 Identities = 55/257 (21%), Positives = 119/257 (46%), Gaps = 6/257 (2%)

Query: 36  LNMGLDFTGGMVTEAIINHSVTKSQLMDQLQPVLGESVS-ATPSGEEG-RWVIRYPLAAE 93
           +N+ LD  GG    +I   ++ K   M   +   GE ++ AT   E G R+ I      +
Sbjct: 352 VNIRLDSAGGRAVASISRDNIGKPMAMVLFEKGKGEVLTVATIQSELGDRFQITGQATPQ 411

Query: 94  DATPVDIATELHHISDQVQIVSNSMVGSQVGQELIDQGGLALLICLLSILAYLSFRFEWR 153
            A  + +      ++  + I+    +G  +G + I +G  +++    +I  ++   +   
Sbjct: 412 GAADLALLLRAGSLAAPMDIIEERTIGPSLGADNIKKGFHSVVWGFAAIAVFM-IAYYML 470

Query: 154 LASGALLALLHDVILVLGFFAITQMEFNLTVFAAVLAVLGYSLNDSIIISDRIRELLLAK 213
               +++ L  +++L++   ++ Q    L   AA+   LG +++ +++I++R+RE L  +
Sbjct: 471 FGVISMIGLSVNLLLLIAVLSMLQATLTLPGIAAIALALGMAIDANVLINERVREEL--R 528

Query: 214 QQTPTADINDQAIIATFSRTMVTSGTTLMTISALWLMGGAPLQGFAIAMFIGIISGTWSS 273
              P            ++  + ++ TTL+   AL   G  P++GFAI   IGI++  +S+
Sbjct: 529 NGAPPQLAIQNGYAHAWATILDSNVTTLIAGIALLAFGSGPVRGFAIVHCIGILTSMFSA 588

Query: 274 ISIGT-VLPEWLGLESK 289
           +     ++  W G + K
Sbjct: 589 VFFSRGIVNLWYGGKKK 605