Pairwise Alignments

Query, 300 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., preprotein translocase subunit SecF (RefSeq) from Shewanella sp. ANA-3

 Score =  213 bits (543), Expect = 3e-60
 Identities = 118/283 (41%), Positives = 174/283 (61%), Gaps = 3/283 (1%)

Query: 18  IISVLLMVISLGAFAIKGLNMGLDFTGGMVTEAIINHSVTKSQLMDQLQPVLGESVSATP 77
           I+S +L+  SL + A KG+N GLDFTGG V E      V  + L  +L     +      
Sbjct: 22  IMSAILVFGSLVSLATKGINWGLDFTGGTVVEMEFTQPVDLNVLRTKLSAPELDGAVVQN 81

Query: 78  SGEEGRWVIRYPL---AAEDATPVDIATELHHISDQVQIVSNSMVGSQVGQELIDQGGLA 134
            G     ++R  +    + D     +      +   VQ      VG QVG+EL +QGGLA
Sbjct: 82  FGSSRDVLVRLSVKEGVSSDVQVKSVMAAAQQVDAGVQQKRVEFVGPQVGKELAEQGGLA 141

Query: 135 LLICLLSILAYLSFRFEWRLASGALLALLHDVILVLGFFAITQMEFNLTVFAAVLAVLGY 194
           +L+ L+ I+ Y+SFRFEWRLA G++ AL HDVI+ LG F++ Q+EF+LTV A VL V+GY
Sbjct: 142 VLVALICIMIYVSFRFEWRLAFGSVAALAHDVIVTLGVFSVFQLEFDLTVLAGVLTVVGY 201

Query: 195 SLNDSIIISDRIRELLLAKQQTPTADINDQAIIATFSRTMVTSGTTLMTISALWLMGGAP 254
           SLND+I++ DRIRE  L  +++   ++ + +I  T SRT++T+GTTL+T+ AL+L GG  
Sbjct: 202 SLNDTIVVFDRIRENFLKMRKSEPEEVVNVSITQTMSRTIITTGTTLVTVVALFLKGGTM 261

Query: 255 LQGFAIAMFIGIISGTWSSISIGTVLPEWLGLESKHYLPVELD 297
           + GFA A+ +GI  GT+SSI + + L   LG+  +H +PVE++
Sbjct: 262 IHGFATALLLGIFVGTYSSIYVASYLAIKLGICREHMMPVEVE 304