Pairwise Alignments

Query, 300 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., preprotein translocase subunit SecF (RefSeq) from Shewanella sp. ANA-3

 Score =  335 bits (859), Expect = 7e-97
 Identities = 171/279 (61%), Positives = 218/279 (78%), Gaps = 3/279 (1%)

Query: 13  RYITGIISVLLMVISLGAFAIKGLNMGLDFTGGMVTEAIINHSVTKSQLMDQLQPVLGES 72
           RY++  IS+ LM+ SL    +KG N GLDFTGG+VTE  ++  +T S+L   L     + 
Sbjct: 10  RYVSSAISIFLMLASLTIIGMKGFNWGLDFTGGVVTEVQLDRRITSSELQPLLNAAYQQE 69

Query: 73  VSATPSGEEGRWVIRYPLAAEDATPVDIATELHHISDQVQIVSNSMVGSQVGQELIDQGG 132
           V+   + E GRWV+RY   A+  + VDIA  L  + + VQ+++ S+VG QVG+EL +QGG
Sbjct: 70  VTVISASEPGRWVLRYADTAQ--SNVDIAQTLAPLGE-VQVLNTSIVGPQVGKELAEQGG 126

Query: 133 LALLICLLSILAYLSFRFEWRLASGALLALLHDVILVLGFFAITQMEFNLTVFAAVLAVL 192
           LALL+ +L IL YLS+RFEWRLASGAL AL+HDVI VL FF++TQMEFNLTV AAVLA+L
Sbjct: 127 LALLVAMLCILGYLSYRFEWRLASGALFALVHDVIFVLAFFSLTQMEFNLTVLAAVLAIL 186

Query: 193 GYSLNDSIIISDRIRELLLAKQQTPTADINDQAIIATFSRTMVTSGTTLMTISALWLMGG 252
           GYSLNDSIII+DRIRELL+AK +    +IN+QAI+ATFSRTMVTSGTTLMT+ ALW+MGG
Sbjct: 187 GYSLNDSIIIADRIRELLIAKPKLAIQEINNQAIVATFSRTMVTSGTTLMTVGALWIMGG 246

Query: 253 APLQGFAIAMFIGIISGTWSSISIGTVLPEWLGLESKHY 291
            PL+GF+IAMFIGI++GT+SSIS+GT LPE+LGL  +HY
Sbjct: 247 GPLEGFSIAMFIGILTGTFSSISVGTSLPEFLGLTPEHY 285