Pairwise Alignments

Query, 591 a.a., class I poly(R)-hydroxyalkanoic acid synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 627 a.a., Poly-beta-hydroxybutyrate polymerase domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  331 bits (849), Expect = 5e-95
 Identities = 192/495 (38%), Positives = 278/495 (56%), Gaps = 12/495 (2%)

Query: 95  DKRFSHEAWQQDPFFNFIKQSYLLFSKTYLDTINAIEGLDEKAKERILFFSRQMINALSP 154
           DKRF    WQ+ P  N I QS+L+  + + +  N I+GL    ++ + F  RQ+++ +SP
Sbjct: 139 DKRFVAPEWQRWPH-NLIYQSFLMTQQWWYNATNDIDGLSRCDEQVVSFVMRQLLDMMSP 197

Query: 155 SNFIATNPELLRLTLEKNGENLIAGLEQLKEDVASSADILKIRMTNNNAFRLGEDVANTP 214
           +N + TNPE+L  T    G NL+ G + L ED+  +  +          +  G +VA TP
Sbjct: 198 ANGLWTNPEVLAETTRTFGANLVQGTQNLIEDMERA--LAGKPPVGAEDYLPGREVAVTP 255

Query: 215 GEVVFKNEVFELIQYKPLTEQVAVTPLLIVPPFINKYYILDLREKNSMVRWLVEQGHSVF 274
           G+VV ++ +FELIQY P TE VA  P+LIVP +I KYYILDL   NS+VR+LVEQG +VF
Sbjct: 256 GKVVHRSHLFELIQYAPQTETVAAEPILIVPAWIMKYYILDLSPHNSLVRYLVEQGFTVF 315

Query: 275 MISWRNPGAAQAQLNFEDYVLEGVVKAVNAIESITGQEQINAAGYCIGGTVLATTIAYYA 334
           MISWRNP A    L  EDY L  +  A++ I +I  +  ++  GYC+GGT+L+   A   
Sbjct: 316 MISWRNPDAGDRDLGMEDY-LAALDTALDEIGAIVPETGVHGVGYCLGGTLLSVKAA-LM 373

Query: 335 AKRMKKRIKTASFFTTLLDFSQPGEVGAYINDTIIRAIELQNNAKGYMDGRSLSVTFSLL 394
           A+    R+KT S   T  DF  PGE+  +I+++ +  ++     +GY+D + ++  F LL
Sbjct: 374 ARDGDDRLKTLSLLATQTDFEDPGELQLFISESQLSYLDHMMWDQGYLDTKQMAGAFQLL 433

Query: 395 RENSLYWNYYVDNYLKGQSPVDFDLLYWNSDSTNVAGACHNFLLRELYLENKLVQDKGVK 454
           R   L W+ YV  YL G+    FDL+ WN+D+T +    H+  LR ++L+N+L Q +  +
Sbjct: 434 RSRDLIWSRYVHEYLMGRRQPMFDLMAWNADATRMPYRMHSEYLRSMFLDNQLAQGQ-YR 492

Query: 455 VGGVWIDLDKIKVPSYFISTKEDHIALWQGTYRGALRTGGNKTFVLGESGHIAGIVNHPD 514
           VGG  + L  I+ P + +ST  DH+A WQ  Y+  L    + TFVL   GH AGIV+ P 
Sbjct: 493 VGGRPVALSDIRAPVFCVSTTGDHVAPWQSVYKLHLLADTDITFVLTSGGHNAGIVSEPG 552

Query: 515 KRKYGYWVNDTLDDS-----AEDWLETAQHREGSWWVHWNEWLNGFADGSKVEPYPLGNA 569
            +   Y +  TL D+      EDW    Q ++GSWW     WL       +  P P+G  
Sbjct: 553 HKGRSYQIR-TLPDAEHYIPPEDWRAQTQVQDGSWWPEHVAWLRAHGAPEEGPPPPMGRK 611

Query: 570 DYPVLYSAPGEYVKQ 584
               L  APG YV Q
Sbjct: 612 GAGDLRDAPGAYVLQ 626