Pairwise Alignments

Query, 700 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 289 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a

 Score = 80.9 bits (198), Expect = 8e-20
 Identities = 70/270 (25%), Positives = 120/270 (44%), Gaps = 14/270 (5%)

Query: 151 SLISIILLIVIFIVYPSIAIFLPMFKDDMGNWTA-WQFMTILSQSHTLTVIYNSIALGIA 209
           +L   + +++ F + P   + +   K   GN +  WQ   +LS +  L  +  +  L + 
Sbjct: 28  ALAPAMAVLLAFWLLPLTHLIVLGAKSTDGNASGYWQ---VLSSAQYLGSLVQTCLLALV 84

Query: 210 VGVGATFFGLIFAIYTTR--IAKRSAFIARVFSILPIVTPPFIVGLGVTLMLGRSGYITE 267
           V + A   G I  ++  R     RSA +A +    P+  P  +VG  V L+ GR G    
Sbjct: 85  VTLAALLVGGISGVFLARNHFFGRSALVALL--TFPLAFPGVVVGFLVILLAGRQGIFAA 142

Query: 268 LMVDGFGLQKTNWL--YGFTGIWLAQVLAFAPMSFMILDGALKSLHPSLEEASYTLKANR 325
           L   G  L    W+  Y  TG+++  +    P   + +  A +SL  SLEEA+++L A  
Sbjct: 143 L---GLHLAGERWVFAYSLTGLFIGYLYFSIPRVILTVMAACESLDRSLEEAAHSLGAGH 199

Query: 326 YQTFFGIIMPLLKPALANSFLIIFVQSLADFSNPLVLGGSFDVLATQIYFYIAGAQLDYA 385
           ++    +I+P L PAL +   I F  S+  F     LG   +V    IY        ++ 
Sbjct: 200 WRVVCDVIVPGLAPALVSCGAICFATSMGAFGTAFTLGTRLNVTPVAIYNVFTN-YANFT 258

Query: 386 SASTLGSVLLLFSLAIFVVQYLWIGQRSYV 415
            A+ L  +L L + A+ ++    +G+   V
Sbjct: 259 VAAALSVILGLVTWAVLLLARRMVGKSGVV 288



 Score = 56.2 bits (134), Expect = 2e-12
 Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 27/221 (12%)

Query: 490 SLITTMIYAGVAAPITALFGLLIAYVVVRQQFYGKKVIEFSTMLCFAVPGTVAGVSYILA 549
           SL+ T + A V      L G +    + R  F+G+  +        A PG V G   IL 
Sbjct: 74  SLVQTCLLALVVTLAALLVGGISGVFLARNHFFGRSALVALLTFPLAFPGVVVGFLVILL 133

Query: 550 ------FNDAPIYLTGTAAIVVISM-------VMRNVPVGIRSGIAGLGQLDKSLDEASL 596
                 F    ++L G   +   S+       +  ++P  I + +A    LD+SL+EA+ 
Sbjct: 134 AGRQGIFAALGLHLAGERWVFAYSLTGLFIGYLYFSIPRVILTVMAACESLDRSLEEAAH 193

Query: 597 SLRASSLQTIRYIILPLLRPAILSTLVYSFVRAMTTVSAIIFL-----VTPET--RVATS 649
           SL A   + +  +I+P L PA++S     F  +M        L     VTP     V T+
Sbjct: 194 SLGAGHWRVVCDVIVPGLAPALVSCGAICFATSMGAFGTAFTLGTRLNVTPVAIYNVFTN 253

Query: 650 YILNRVEDGEYGIAIAYGSVLIVVMLAIILLFDLLVGEARV 690
           Y         + +A A   +L +V  A++LL   +VG++ V
Sbjct: 254 Y-------ANFTVAAALSVILGLVTWAVLLLARRMVGKSGV 287