Pairwise Alignments

Query, 700 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 226 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a

 Score = 77.0 bits (188), Expect = 8e-19
 Identities = 47/169 (27%), Positives = 85/169 (50%), Gaps = 9/169 (5%)

Query: 242 LPIVTPPFIVGLGVTLMLGRSGYITELMVDGFGLQKTNWLYGFTGIWLAQVLAFAPMSFM 301
           LP+V PP ++G  + L+LG +G + +L     GL      + F G+ +  VL   P    
Sbjct: 53  LPLVLPPTVIGFYLLLLLGPNGAVGQL-TQSLGLGTLT--FSFAGLVIGSVLYSMPFVVQ 109

Query: 302 ILDGALKSLHPSLEEASYTLKANRYQTFFGIIMPLLKPALANSFLIIFVQSLADFSNPLV 361
            L  A  ++     E + TL+A  + TFF +I+PL KP    + ++ F  ++ +F   L+
Sbjct: 110 PLQNAFAAIGTRPLEVAATLRAGPWDTFFHVILPLAKPGFITAAILGFAHTVGEFGVVLM 169

Query: 362 LGGSFD----VLATQIYFYIAGAQLDYASASTLGSVLLLFSLAIFVVQY 406
           +GG+      V++ QI+ ++    ++Y  A  L   +L+FS  + +  Y
Sbjct: 170 IGGNIPEKTRVVSVQIFDHV--ESMEYLQAHWLAGAMLVFSFLVLLALY 216



 Score = 46.2 bits (108), Expect = 2e-09
 Identities = 46/203 (22%), Positives = 85/203 (41%), Gaps = 15/203 (7%)

Query: 494 TMIYAGVAAPITALFGLLIAYVVVRQQFYGKKVIEFSTMLCFAVPGTVAGVSYILAF--N 551
           T+  A +   I  + G  +A  + R   + K  I     L   +P TV G   +L    N
Sbjct: 14  TLKLASLTTVILLIIGTPVALWLARTDSWLKGPIGAVVALPLVLPPTVIGFYLLLLLGPN 73

Query: 552 DAPIYLTGTAAI---------VVISMVMRNVPVGIRSGIAGLGQLDKSLDEASLSLRASS 602
            A   LT +  +         +VI  V+ ++P  ++        +     E + +LRA  
Sbjct: 74  GAVGQLTQSLGLGTLTFSFAGLVIGSVLYSMPFVVQPLQNAFAAIGTRPLEVAATLRAGP 133

Query: 603 LQTIRYIILPLLRPAILSTLVYSFVRAMTTVSAIIFL---VTPETRVATSYILNRVEDGE 659
             T  ++ILPL +P  ++  +  F   +     ++ +   +  +TRV +  I + VE  E
Sbjct: 134 WDTFFHVILPLAKPGFITAAILGFAHTVGEFGVVLMIGGNIPEKTRVVSVQIFDHVESME 193

Query: 660 YGIA-IAYGSVLIVVMLAIILLF 681
           Y  A    G++L+   L ++ L+
Sbjct: 194 YLQAHWLAGAMLVFSFLVLLALY 216