Pairwise Alignments

Query, 700 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 273 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a

 Score = 82.4 bits (202), Expect = 2e-20
 Identities = 55/197 (27%), Positives = 101/197 (51%), Gaps = 13/197 (6%)

Query: 501 AAPITALFGLLIAYVVVRQQFYGKKVIEFSTMLCFAVPGTVAGVSYILAFN--------- 551
           AA I  + G L+A+V+VR  F G+KVI+    L FA+P  VAG++    +          
Sbjct: 69  AALINGVIGTLLAWVLVRYTFPGRKVIDAMIDLPFALPTAVAGIALTALYAPNGWVGQFA 128

Query: 552 -DAPIYLTGTAAIVVISMVMRNVPVGIRSGIAGLGQLDKSLDEASLSLRASSLQTIRYII 610
            D    +  T   + +++    +P  +R+    L  + + ++EA+  L A  LQ  R+I+
Sbjct: 129 ADLGFKIAYTPLGITLALTFVTLPFVVRTVQPVLADIPREVEEAAACLGARPLQVFRHIL 188

Query: 611 LPLLRPAILSTLVYSFVRAMTTVSAIIFL---VTPETRVATSYILNRVEDGEYGIAIAYG 667
           +P L PA L+    +F R +    ++IF+   +  +T +    I+ +++  +Y  A A G
Sbjct: 189 VPALLPAWLTGFALAFARGVGEYGSVIFIAGNMPMKTEILPLLIMVKLDQYDYTGATAIG 248

Query: 668 SVLIVVMLAIILLFDLL 684
            +++VV   ++LL +LL
Sbjct: 249 VMMLVVSFILLLLINLL 265



 Score = 61.6 bits (148), Expect = 5e-14
 Identities = 51/247 (20%), Positives = 99/247 (40%), Gaps = 10/247 (4%)

Query: 163 IVYPSIAIFLPMFKDDM--GNWTAWQFMTILSQSHTLTVIYNSIALGIAVGVGATFFGLI 220
           +VY S+ + +P+    +     T  QF TI++    +  +  S        +     G +
Sbjct: 20  LVYLSLIVLIPLAAMFVHAAQLTWDQFWTIITAPRVIAALKLSFGTAFYAALINGVIGTL 79

Query: 221 FAIYTTRIAKRSAFIARVFSILPIVTPPFIVGLGVTLMLGRSGYITELMVD-GFGLQKTN 279
            A    R       +      LP   P  + G+ +T +   +G++ +   D GF +  T 
Sbjct: 80  LAWVLVRYTFPGRKVIDAMIDLPFALPTAVAGIALTALYAPNGWVGQFAADLGFKIAYTP 139

Query: 280 WLYGFTGIWLAQVLAFAPMSFMILDGALKSLHPSLEEASYTLKANRYQTFFGIIMPLLKP 339
                 GI LA      P     +   L  +   +EEA+  L A   Q F  I++P L P
Sbjct: 140 -----LGITLALTFVTLPFVVRTVQPVLADIPREVEEAAACLGARPLQVFRHILVPALLP 194

Query: 340 ALANSFLIIFVQSLADFSNPLVLGGSFDVLA--TQIYFYIAGAQLDYASASTLGSVLLLF 397
           A    F + F + + ++ + + + G+  +      +   +   Q DY  A+ +G ++L+ 
Sbjct: 195 AWLTGFALAFARGVGEYGSVIFIAGNMPMKTEILPLLIMVKLDQYDYTGATAIGVMMLVV 254

Query: 398 SLAIFVV 404
           S  + ++
Sbjct: 255 SFILLLL 261