Pairwise Alignments
Query, 700 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056
Subject, 597 a.a., ABC transporter permease subunit from Rhodopseudomonas palustris CGA009
Score = 104 bits (260), Expect = 1e-26
Identities = 115/528 (21%), Positives = 215/528 (40%), Gaps = 43/528 (8%)
Query: 157 LLIVIFIVYPSIAIFLPMFKDDMGNWTAWQFMTILSQSHTLTVIYNSIALGIAVGVGATF 216
LL++ + + LP+ + + ++T + + + + S+ + + V F
Sbjct: 27 LLLLPAVAFLGFIYLLPLIDLIRISISGPSWLTYFQRVFAVPLYWESLVRTMQISVTVAF 86
Query: 217 FGLIFAIYTTRIAKRSAFIARVFSILPIVTPPFIVGLGVT----LMLGRSGYITELMVD- 271
L+F T + R+ + R IV P FI L T ++LGR+G + +L+V
Sbjct: 87 LCLLFGYPTALLIHRTQGLTRALIATAIVLPYFIAILIRTYAWMVLLGRTGPVNKLLVAI 146
Query: 272 GFGLQKTNWLYGFTGIWLAQVLAFAPMSFMILDGALKSLHPSLEEASYTLKANRYQTFFG 331
G + L+ + L P+ + + ++ L P L A+ A F+
Sbjct: 147 GILGEPVQLLFHRGTVLLGMTAVLLPLMVLTIYSSVSRLDPGLTRAALASGAGPIAVFWR 206
Query: 332 IIMPLLKPALANSFLIIFVQSLADFSNPLVLGGSFDVLATQIYFYIAGAQLDYASASTLG 391
+++PL P + FL++FV ++ F P +LGG D + A + LG
Sbjct: 207 VLLPLTLPGIGAGFLLVFVAAIGFFITPTLLGGPGDQMFAMHITQQADSVTSEGFLQALG 266
Query: 392 SVLLLFSLAIFVV-------QYLWIGQR--------SYVTISGKAYR-------GDVQEM 429
VLLL +LA+ + +++W G++ + T + + R D
Sbjct: 267 VVLLLITLAVVAIAGRFLGLEFIWGGRKLTESNAASTTSTAADDSTRRSIGSSLADTIGW 326
Query: 430 PASLKLGV--------TVTLYAWMIFNVLLYGSIFFGSFTVNWGVDYTLTFKN---YLNL 478
P LG+ TV + ++ VL+ + +++ LTF L
Sbjct: 327 PVLRLLGLLPAGVGTWTVRVMGGVVVAVLILPIVVV--MVISFSSASYLTFPPPGFSLRW 384
Query: 479 FGNGMSDGAW-PSLITTMIYAGVAAPITALFGLLIAYVVVRQQFYGKKVIEFSTMLCFAV 537
+ SD W + T+ + A V+A I G A +VR GK I + V
Sbjct: 385 YEQFFSDTNWMRAFWTSALIALVSAVIAVGLGTCAALGIVRGDIRGKSAIMLLLVSPIIV 444
Query: 538 PGTVAGVSYILAFNDAPIYLTGTAAIVVISMVMRNVPVGIRSGIAGLGQLDKSLDEASLS 597
P V G+S F L G+ + + + +P+ + A L +DK L++A+
Sbjct: 445 PPVVLGLSLYTLF--LKFDLIGSVFGLAAAHAIGGLPIVVVILAAALQGVDKRLEQAAAV 502
Query: 598 LRASSLQTIRYIILPLLRPAILSTLVYSFVRAMTTVSAIIFLVTPETR 645
ASSL +R + LP + P + + ++F+ + + +FL + + +
Sbjct: 503 HGASSLTVLRLVTLPAIAPGLAAATFFAFLHSFDELVLTLFLSSAQLK 550
Score = 49.7 bits (117), Expect = 4e-10
Identities = 47/215 (21%), Positives = 87/215 (40%), Gaps = 16/215 (7%)
Query: 488 WPSLITTMIYAGVAAPITALFGL---------------LIAYVVVRQQFYGKKVIEFSTM 532
W SL+ TM + A + LFG LIA +V F + ++ M
Sbjct: 71 WESLVRTMQISVTVAFLCLLFGYPTALLIHRTQGLTRALIATAIVLPYFIAILIRTYAWM 130
Query: 533 LCFAVPGTVAGVSYILAFNDAPIYLTGTAAIVVISMVMRNVPVGIRSGIAGLGQLDKSLD 592
+ G V + + P+ L V++ M +P+ + + + + +LD L
Sbjct: 131 VLLGRTGPVNKLLVAIGILGEPVQLLFHRGTVLLGMTAVLLPLMVLTIYSSVSRLDPGLT 190
Query: 593 EASLSLRASSLQTIRYIILPLLRPAILSTLVYSFVRAMTTVSAIIFLVTPETRVATSYIL 652
A+L+ A + ++LPL P I + + FV A+ L P ++ +I
Sbjct: 191 RAALASGAGPIAVFWRVLLPLTLPGIGAGFLLVFVAAIGFFITPTLLGGPGDQMFAMHIT 250
Query: 653 NRVED-GEYGIAIAYGSVLIVVMLAIILLFDLLVG 686
+ + G A G VL+++ LA++ + +G
Sbjct: 251 QQADSVTSEGFLQALGVVLLLITLAVVAIAGRFLG 285
Score = 41.6 bits (96), Expect = 1e-07
Identities = 42/216 (19%), Positives = 84/216 (38%), Gaps = 17/216 (7%)
Query: 150 GSLISIILLIVIFIVYPSIAIFLPMFKDDMGNWTAWQFMTILSQSHTLTVIYNSIALGIA 209
G ++++++L ++ ++ S + + G W + S ++ + + S + +
Sbjct: 349 GVVVAVLILPIVVVMVISFSSASYLTFPPPGFSLRW-YEQFFSDTNWMRAFWTSALIALV 407
Query: 210 VGVGATFFGLIFAIYTTRIAKRSAFIARVFSILPIVTPPFIVGLGVTLMLGRSGYITELM 269
V A G A+ R R + + PI+ PP ++GL + Y L
Sbjct: 408 SAVIAVGLGTCAALGIVRGDIRGKSAIMLLLVSPIIVPPVVLGLSL--------YTLFLK 459
Query: 270 VDGFGLQKTNWLYGFTGIWLAQVLAFAPMSFMILDGALKSLHPSLEEASYTLKANRYQTF 329
D G G+ A + P+ +IL AL+ + LE+A+ A+
Sbjct: 460 FDLIG--------SVFGLAAAHAIGGLPIVVVILAAALQGVDKRLEQAAAVHGASSLTVL 511
Query: 330 FGIIMPLLKPALANSFLIIFVQSLADFSNPLVLGGS 365
+ +P + P LA + F+ S + L L +
Sbjct: 512 RLVTLPAIAPGLAAATFFAFLHSFDELVLTLFLSSA 547