Pairwise Alignments

Query, 700 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 255 a.a., ABC transporter permease from Methanococcus maripaludis S2

 Score = 75.5 bits (184), Expect = 3e-18
 Identities = 56/200 (28%), Positives = 103/200 (51%), Gaps = 14/200 (7%)

Query: 490 SLITTMIYAGVAAPITALFGLLIAYVVVRQQFYGKKVIEFSTMLCFAVPGTVAGVSYILA 549
           SL+ ++  AG A  +    G+ ++Y++ R  F GK V+E    +  A+P +V G+  ILA
Sbjct: 48  SLLVSIKAAGTATVLAIFLGIPLSYLLARYHFTGKNVVEAIIDIPMAIPHSVIGIM-ILA 106

Query: 550 F----------NDAPIYLTGTAAIVVISMVMRNVPVGIRSGIAGLGQLDKSLDEASLSLR 599
           F           D    +      +V+ M+   +P  + SG  G   +++ L+  S +L 
Sbjct: 107 FFYGTSIGRGIEDIGFEIVDNFWGIVVVMLYVGLPYMVNSGRDGFLMVEEELENVSRTLG 166

Query: 600 ASSLQTIRYIILPLLRPAILSTLVYSFVRAMTTVSAIIFLVTPETRVATSYILNRVEDGE 659
           AS ++T   I LPL++  ++S  + +F R ++ V AI+ +V    +     IL+R    E
Sbjct: 167 ASKIKTFFNISLPLIKNNLVSGSILTFARGISEVGAIL-IVAYFPKTTPVLILDRF--NE 223

Query: 660 YGIAIAYGSVLIVVMLAIIL 679
           YG++ +    +I+++L+IIL
Sbjct: 224 YGLSSSKPISVIMIVLSIIL 243



 Score = 45.4 bits (106), Expect = 3e-09
 Identities = 45/252 (17%), Positives = 102/252 (40%), Gaps = 21/252 (8%)

Query: 155 IILLIVIFIVYPSIAIFLPMFKDDMGNWTAWQFMTILSQSHTLTVIYNSIALGIAVGVGA 214
           I L +++F++ P + + L     + GN          + S  +  +  SI       V A
Sbjct: 14  ISLFLLLFVLLPLLNMIL-----NPGNVAG-----AFNDSEVIKSLLVSIKAAGTATVLA 63

Query: 215 TFFGLIFAIYTTRIAKRSAFIARVFSILPIVTPPFIVGLGVTLMLGRSGYITELMVDGFG 274
            F G+  +    R       +      +P+  P  ++G+ +      +     +   GF 
Sbjct: 64  IFLGIPLSYLLARYHFTGKNVVEAIIDIPMAIPHSVIGIMILAFFYGTSIGRGIEDIGFE 123

Query: 275 LQKTNWLYGFTGIWLAQVLAFAPMSFMILDG--ALKSLHPSLEEASYTLKANRYQTFFGI 332
           +    W        +  V+ +  + +M+  G      +   LE  S TL A++ +TFF I
Sbjct: 124 IVDNFW-------GIVVVMLYVGLPYMVNSGRDGFLMVEEELENVSRTLGASKIKTFFNI 176

Query: 333 IMPLLKPALANSFLIIFVQSLADFSNPLVLGGSFDVLATQIYFYIAGAQLDYASASTLGS 392
            +PL+K  L +  ++ F + +++    L++  ++    T +       +   +S+  +  
Sbjct: 177 SLPLIKNNLVSGSILTFARGISEVGAILIV--AYFPKTTPVLILDRFNEYGLSSSKPISV 234

Query: 393 VLLLFSLAIFVV 404
           ++++ S+ +F V
Sbjct: 235 IMIVLSIILFSV 246