Pairwise Alignments

Query, 700 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 545 a.a., iron ABC transporter permease from Methanococcus maripaludis JJ

 Score =  278 bits (710), Expect = 6e-79
 Identities = 163/540 (30%), Positives = 305/540 (56%), Gaps = 17/540 (3%)

Query: 150 GSLISIILLIVIFIVYPSIAIFLPMFKDDMGNWTAWQFMTILSQSHTLTVIYNSIALGIA 209
           G  I   + ++IFI+YP   +FL  F    G +T   +   +S S+   ++ NSI +   
Sbjct: 21  GFYILANVFLLIFIMYPVFTVFLQSFYGSNG-FTLDAYSKFISDSYYFGILKNSIVVACF 79

Query: 210 VGVGATFFGLIFAIYTTRIAKRSAFIARVFSILPIVTPPFIVGLGVTLMLGRSGYITELM 269
             + + F G IF+I   +   +     ++   LPI+TP FI  L    + GR G +T  +
Sbjct: 80  STIISIFLGFIFSIIIFKTDFKFKNFFKIAVFLPIITPGFISSLAYVFLFGRHGAVTYGL 139

Query: 270 VDGFGLQKTNWLYGFTGIWLAQVLAFAPMSFMILDGALKSLHPSLEEASYTLKANRYQTF 329
           +   GL+    +YG+  + + Q + +   +F I+   L  +    E+A+  L +N +Q F
Sbjct: 140 L---GLEPN--IYGWKSVVIMQSIDYTTTAFFIISAVLLGISGEFEDAARNLGSNEFQVF 194

Query: 330 FGIIMPLLKPALANSFLIIFVQSLADFSNPLVLGGSFDVLATQIYFYIAGAQLDYASAST 389
             + +PLL P + ++ L+IF+QS+ADF  P+++GG+F+ LAT  YF I G + +   AST
Sbjct: 195 KKVTLPLLIPGILSAGLLIFMQSMADFGTPIIVGGNFNTLATASYFEIIG-RYNTQMAST 253

Query: 390 LGSVLLLFSLAIFVVQYLWIGQRSYVTISGKAYRGDVQEMPASLKLGVTVTLYAWMIFNV 449
           L  +LL  S+A+F +   +   + Y     K  +  +  +   + LG     ++ + +  
Sbjct: 254 LSVILLFPSMALFYLYSKY--HKGYELKKSKLTKYSLSNIQKII-LGFPAIFFSILAY-- 308

Query: 450 LLYGSIFFGSFTVNWGVDYTLTFKNYLNLFGNGMSDGAWPSLITTMIYAGVAAPITALFG 509
           LL+ ++F  SFT ++G +Y LT    L+ F   +S G   ++  T+ YA  ++ + A  G
Sbjct: 309 LLFFAVFVASFTKSFGHNYALT----LDYFFEAISAGQL-AIKNTLFYALSSSILVAFLG 363

Query: 510 LLIAYVVVRQQFYGKKVIEFSTMLCFAVPGTVAGVSYILAFNDAPIYLTGTAAIVVISMV 569
           +  +Y++ R +F+G+K+++    L FA+PGT  G+ Y+LAFN+ P+ LTGT++I++++ +
Sbjct: 364 VAYSYIIYRGKFFGRKLMDLVITLPFAIPGTFMGLGYLLAFNNYPLLLTGTSSIIILNCM 423

Query: 570 MRNVPVGIRSGIAGLGQLDKSLDEASLSLRASSLQTIRYIILPLLRPAILSTLVYSFVRA 629
           +R +P   ++G + L Q+++S++EASL+L AS L+T   ++LPLL PAI+ +++Y+F+  
Sbjct: 424 VRKLPFSFKTGNSVLSQIEESVEEASLNLGASRLKTFYKVVLPLLEPAIIFSMIYTFIAT 483

Query: 630 MTTVSAIIFLVTPETRVATSYILNRVEDGEYGIAIAYGSVLIVVMLAIILLFDLLVGEAR 689
           + ++ +IIFL+T  T+V ++ +     + + G+   Y   ++++ +  IL    L G+ +
Sbjct: 484 IKSLGSIIFLMTANTKVLSAMVFESTINRQLGVGACYSMFMVILSIIGILGILRLKGDKK 543



 Score = 47.0 bits (110), Expect = 2e-09
 Identities = 51/264 (19%), Positives = 108/264 (40%), Gaps = 13/264 (4%)

Query: 444 WMIFNVLLYGSIFFGSFTVNWGVDYTLTFKNYLNLFGNGMSDGAWPSLITTMIYAGVAAP 503
           +++ NV L   I +  FTV     Y       L+ +   +SD  +  ++   I     + 
Sbjct: 23  YILANVFLLIFIMYPVFTVFLQSFYGSNGFT-LDAYSKFISDSYYFGILKNSIVVACFST 81

Query: 504 ITALF-GLLIAYVVVRQQFYGKKVIEFSTMLCFAVPGTVAGVSYILAF--NDAPIY---- 556
           I ++F G + + ++ +  F  K   + +  L    PG ++ ++Y+  F  + A  Y    
Sbjct: 82  IISIFLGFIFSIIIFKTDFKFKNFFKIAVFLPIITPGFISSLAYVFLFGRHGAVTYGLLG 141

Query: 557 ----LTGTAAIVVISMVMRNVPVGIRSGIAGLGQLDKSLDEASLSLRASSLQTIRYIILP 612
               + G  ++V++  +              LG +    ++A+ +L ++  Q  + + LP
Sbjct: 142 LEPNIYGWKSVVIMQSIDYTTTAFFIISAVLLG-ISGEFEDAARNLGSNEFQVFKKVTLP 200

Query: 613 LLRPAILSTLVYSFVRAMTTVSAIIFLVTPETRVATSYILNRVEDGEYGIAIAYGSVLIV 672
           LL P ILS  +  F+++M      I +      +AT+     +      +A     +L+ 
Sbjct: 201 LLIPGILSAGLLIFMQSMADFGTPIIVGGNFNTLATASYFEIIGRYNTQMASTLSVILLF 260

Query: 673 VMLAIILLFDLLVGEARVSRSKAT 696
             +A+  L+        + +SK T
Sbjct: 261 PSMALFYLYSKYHKGYELKKSKLT 284