Pairwise Alignments

Query, 700 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 551 a.a., binding-protein-dependent transport system inner membrane protein from Klebsiella michiganensis M5al

 Score =  141 bits (355), Expect = 1e-37
 Identities = 118/455 (25%), Positives = 213/455 (46%), Gaps = 25/455 (5%)

Query: 238 VFSILPIVTPPFIVGLGVTLMLGRSGYITELMVDGFGLQKTNWLYGFTGIWLAQVLAFAP 297
           V  ++P +TPP+I  L  TL+L  +GY+ +L     G    + L+  +GI L   L   P
Sbjct: 97  VLFLIPFLTPPYIAALAWTLLLQSNGYLQQLT----GWDLNDLLFSRSGIVLVMTLNIFP 152

Query: 298 MSFMILDGALKSLHPSLEEASYTLKANRYQTFFGIIMPLLKPALANSFLIIFVQSLADFS 357
           + +  +  +L +    L   +    A  ++ F+ I +P+L PALA   L+ F  ++ ++ 
Sbjct: 153 VVYFAVSRSLLASGQRLAIVARVHGARAWRAFWHITLPMLSPALAAGMLLAFTLAIEEYG 212

Query: 358 NPLVLG--GSFDVLATQIYFYIAGAQLDYASASTLGSVLLLFSLAIFVVQYLWIGQRSYV 415
            P  LG      +L   I   +A   +D   AS L  +L+  +L  + +Q    G +   
Sbjct: 213 VPAALGPRAGLLMLTVGIEKKLADWPIDLPGASLLSLLLMAVALLAWWLQKRLTGDKEVT 272

Query: 416 TISGKAYRGDVQEM-----PASLKL----GVTVTLYAWMIFNVLLYGSIFFGSFTVNWGV 466
           +++GK       E+     PA+L +    GV V L    +    L  ++  G    N+  
Sbjct: 273 SVTGKPGENSGAELGWLALPAALLMASVGGVAVMLPGASMVLTSLMSTLSGGIHGDNF-- 330

Query: 467 DYTLTFKNYLNLFGNGMSDGAWPSLITTMIYAGVAAPITALFGLLIAYVVVRQQFYGKKV 526
               T +++  LF       A  +L T++  A  +A I  + GLL A++V+ Q+  G  +
Sbjct: 331 ----TLRHFTALFAQ--QGDALSALGTSLSLALASALIVGVIGLLAAWLVLVQKMKGSAI 384

Query: 527 IEFSTMLCFAVPGTVAGVSYILAFNDA--PIYLTGTAAIVVISMVMRNVPVGIRSGIAGL 584
           ++  +++  A+PG V GV  IL +N    P+    T  ++++S     +P  +R   + L
Sbjct: 385 VDALSLMPAALPGVVVGVGLILLWNQPFWPVSPYNTGFMLLLSYCCLLLPWPVRYVGSAL 444

Query: 585 GQLDKSLDEASLSLRASSLQTIRYIILPLLRPAILSTLVYSFVRAMTTVSAIIFLVTPET 644
            QL  +L+ A+    A+ LQ +R I+LPL+ PA+L+ ++  F  A   +   + L    T
Sbjct: 445 RQLGHNLEPAARVHGATPLQALRLIVLPLVFPALLAAMLMVFAIASRELVTSLLLAPAGT 504

Query: 645 RVATSYILNRVEDGEYGIAIAYGSVLIVVMLAIIL 679
           +    +I  + E G  G  +A  S+ +   L ++L
Sbjct: 505 QTVAVFIWRQFEQGSPGQGMAMASLTLFTGLGLML 539



 Score = 46.2 bits (108), Expect = 4e-09
 Identities = 42/183 (22%), Positives = 76/183 (41%), Gaps = 13/183 (7%)

Query: 181 NWTAWQFMTILSQS-HTLTVIYNSIALGIAVGVGATFFGLIFAIYTTRIAKRSAFIARVF 239
           N+T   F  + +Q    L+ +  S++L +A  +     GL+ A        + + I    
Sbjct: 329 NFTLRHFTALFAQQGDALSALGTSLSLALASALIVGVIGLLAAWLVLVQKMKGSAIVDAL 388

Query: 240 SILPIVTPPFIVGLGVTLMLGRSGYITELMVDGFGLQKTNWLYGFTGIWLAQVLAFAPMS 299
           S++P   P  +VG+G+ L+  +  +       GF L             L+      P  
Sbjct: 389 SLMPAALPGVVVGVGLILLWNQPFWPVSPYNTGFML------------LLSYCCLLLPWP 436

Query: 300 FMILDGALKSLHPSLEEASYTLKANRYQTFFGIIMPLLKPALANSFLIIFVQSLADFSNP 359
              +  AL+ L  +LE A+    A   Q    I++PL+ PAL  + L++F  +  +    
Sbjct: 437 VRYVGSALRQLGHNLEPAARVHGATPLQALRLIVLPLVFPALLAAMLMVFAIASRELVTS 496

Query: 360 LVL 362
           L+L
Sbjct: 497 LLL 499