Pairwise Alignments

Query, 700 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 281 a.a., sulfate ABC transporter, inner membrane subunit CysT (RefSeq) from Shewanella sp. ANA-3

 Score = 82.8 bits (203), Expect = 2e-20
 Identities = 55/203 (27%), Positives = 108/203 (53%), Gaps = 13/203 (6%)

Query: 494 TMIYAGVAAPITALFGLLIAYVVVRQQFYGKKVIEFSTMLCFAVPGTVAGVSYILAF--- 550
           T++ A  A+    LFGLL+A+V+VR +F GK++++    L FA+P  VAG++    +   
Sbjct: 67  TILSALAASLFNCLFGLLLAWVLVRYEFPGKRILDALVDLPFALPTAVAGITLATLYAEN 126

Query: 551 -------NDAPIYLTGTAAIVVISMVMRNVPVGIRSGIAGLGQLDKSLDEASLSLRASSL 603
                   +  + +  T   +V++M+  ++P  +R+    L +L    +EA ++L A+  
Sbjct: 127 GQIGSLLAEIGVKVAYTPLGIVVAMIFTSIPFVVRTVQPVLEELSHDEEEAGMTLGATDG 186

Query: 604 QTIRYIILPLLRPAILSTLVYSFVRAMTTVSAIIFL---VTPETRVATSYILNRVEDGEY 660
                +ILP L PA++     SF R++    A+IF+   +   + + +  I  R+++ ++
Sbjct: 187 AVFWRVILPSLWPALVVGTALSFTRSLGEFGAVIFIAGNMPYISEITSLMIFVRLQEFDF 246

Query: 661 GIAIAYGSVLIVVMLAIILLFDL 683
             A A  SV+++  L ++LL +L
Sbjct: 247 AGASAIASVVLLTSLLLLLLINL 269



 Score = 75.9 bits (185), Expect = 2e-18
 Identities = 59/254 (23%), Positives = 111/254 (43%), Gaps = 12/254 (4%)

Query: 161 IFIVYPSIAIFLP----MFKDDMGNWTAWQFMTILSQSHTLTVIYNSIALGIAVGVGATF 216
           + +++ S+ + LP    + +    +W   ++  +++    L     +I   +A  +    
Sbjct: 23  VSLLFVSLILLLPTTGLIMQTSQMSWA--EYWGVIADPRVLASYKVTILSALAASLFNCL 80

Query: 217 FGLIFAIYTTRIAKRSAFIARVFSILPIVTPPFIVGLGVTLMLGRSGYITELMVDGFGLQ 276
           FGL+ A    R       I      LP   P  + G+ +  +   +G I  L+ +  G++
Sbjct: 81  FGLLLAWVLVRYEFPGKRILDALVDLPFALPTAVAGITLATLYAENGQIGSLLAE-IGVK 139

Query: 277 KTNWLYGFTGIWLAQVLAFAPMSFMILDGALKSLHPSLEEASYTLKANRYQTFFGIIMPL 336
                Y   GI +A +    P     +   L+ L    EEA  TL A     F+ +I+P 
Sbjct: 140 VA---YTPLGIVVAMIFTSIPFVVRTVQPVLEELSHDEEEAGMTLGATDGAVFWRVILPS 196

Query: 337 LKPALANSFLIIFVQSLADFSNPLVLGGSFDVLA--TQIYFYIAGAQLDYASASTLGSVL 394
           L PAL     + F +SL +F   + + G+   ++  T +  ++   + D+A AS + SV+
Sbjct: 197 LWPALVVGTALSFTRSLGEFGAVIFIAGNMPYISEITSLMIFVRLQEFDFAGASAIASVV 256

Query: 395 LLFSLAIFVVQYLW 408
           LL SL + ++  LW
Sbjct: 257 LLTSLLLLLLINLW 270