Pairwise Alignments

Query, 527 a.a., signal transduction histidine-protein kinase/phosphatase UhpB from Vibrio cholerae E7946 ATCC 55056

Subject, 1046 a.a., sensor histidine kinase (RefSeq) from Shewanella amazonensis SB2B

 Score =  100 bits (248), Expect = 4e-25
 Identities = 72/242 (29%), Positives = 124/242 (51%), Gaps = 13/242 (5%)

Query: 283  RQHQLALL--LQKMNTRLAKELREKQDLARQLVSVEEQIRKSVARELHDEIGQNITAIQI 340
            ++ +LA++  L++    L       ++LA +L   +E+ RKS++RELHD+ GQ++TA QI
Sbjct: 809  KEEKLAVIEKLRQNEQHLKSAFEGMRNLATRLQYAKEEERKSISRELHDQFGQSLTATQI 868

Query: 341  QSMLAERLASNDQAKQAASSVQSLAMRIHQSTRQLLKQLRPHILDELGLEHAIRQLVQEM 400
               L  R    D  K   + + ++   I Q  R +   LRP +LD++GL   +   + +M
Sbjct: 869  SLQLFRRQHPGD-PKLIDTCITTIQAMIKQ-VRAISFDLRPSLLDDVGLVAGLHHQLNKM 926

Query: 401  RFAEQGMTVRLNMGVNPQKLDDTTRVTLYRIVQELLNNICKHAKATRVHISLFP-GSEMV 459
              +     +  N   +  +L     +TL+R++QE + N  +HA ATR+ + L+P G ++ 
Sbjct: 927  S-SSLTHPIIFNADTDIPELSPELTITLFRVIQESVTNAIRHANATRIEVKLYPDGDKIK 985

Query: 460  LEVKDDGI-----GLPTDWRVRGH-GLKGLSERVSALGGQLKMTSSTFQTGTRIIVNLPT 513
             EV D+G+     G+       GH GL G+ ERV +  G L + +     G  I V  P 
Sbjct: 986  AEVSDNGVGFEPGGISAKVSKGGHLGLLGIEERVKSQNGNLNIKAIP-HGGVSISVEFPY 1044

Query: 514  KR 515
            ++
Sbjct: 1045 EK 1046