Pairwise Alignments

Query, 527 a.a., signal transduction histidine-protein kinase/phosphatase UhpB from Vibrio cholerae E7946 ATCC 55056

Subject, 770 a.a., GAF domain-containing protein from Rhodopseudomonas palustris CGA009

 Score =  111 bits (278), Expect = 9e-29
 Identities = 73/239 (30%), Positives = 126/239 (52%), Gaps = 7/239 (2%)

Query: 279 IAISRQHQLALLLQKMNTRLAKELREKQDLARQLVSVEEQIRKSVARELHDEIGQNITAI 338
           + +SR   +A  LQ+   R      +   + R+ V  +E  R  +ARELHD +GQ++T +
Sbjct: 533 LGLSRSKDVAKTLQEEKRRRVLVEADLSKVLRRTVEDQEAERLRIARELHDTLGQSLTLL 592

Query: 339 QIQ-SMLAERLASNDQAKQAASSVQSLAMRIHQSTRQLLKQLRPHILDELGLEHAIRQLV 397
           Q+    L +    N + +Q  + ++SL   + +   +L  ++RP  LD+LG++ AI+ L+
Sbjct: 593 QLGFDKLGQAAGDNPELQQRIAEMKSLTADVGRQANRLAWEIRPTALDDLGIQTAIQNLL 652

Query: 398 QEMRFAEQGMTVRLNMGVNPQKLDDTTRVTLYRIVQELLNNICKHAKATRVHISLFPGSE 457
                 +  +   L+M +  ++L      TLYR++QE L N+ +HA A  V + L  G +
Sbjct: 653 DSWS-EKSSIEFDLHMTLGSRRLPSPVETTLYRVLQEALTNVVRHASARHVSVILQLGDD 711

Query: 458 MV-LEVKDDGIGLPTDWRVRGH---GLKGLSERVSALGGQLKMTSSTFQTGTRIIVNLP 512
            V + V+DDG G  T  R       GL G+ ER+S +GG L++ S+  + GT +   +P
Sbjct: 712 QVTMIVEDDGCGFVTAGRKPPSGRLGLLGIRERLSLVGGSLEIESAPGK-GTALYARIP 769